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5ERS
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BU of 5ers by Molmil
GephE in complex with Mg(2+) - AMP
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, ADENOSINE MONOPHOSPHATE, ...
Authors:Kasaragod, V.B, Schindelin, H.
Deposit date:2015-11-15
Release date:2016-05-04
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Framework for Metal Incorporation during Molybdenum Cofactor Biosynthesis.
Structure, 24, 2016
5ERR
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BU of 5err by Molmil
GephE in complex with Mg(2+) - ADP
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Kasaragod, V.B, Schindelin, H.
Deposit date:2015-11-15
Release date:2016-05-04
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural Framework for Metal Incorporation during Molybdenum Cofactor Biosynthesis.
Structure, 24, 2016
5ERT
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BU of 5ert by Molmil
GephE in complex with Mn(2+) - ADP
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Kasaragod, V.B, Schindelin, H.
Deposit date:2015-11-15
Release date:2016-05-04
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Framework for Metal Incorporation during Molybdenum Cofactor Biosynthesis.
Structure, 24, 2016
1MVG
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BU of 1mvg by Molmil
NMR solution structure of chicken Liver basic Fatty Acid Binding Protein (Lb-FABP)
Descriptor: Liver basic Fatty Acid Binding Protein
Authors:Vasile, F, Ragona, L, Catalano, M, Zetta, L, Perduca, M, Monaco, H, Molinari, H.
Deposit date:2002-09-25
Release date:2003-03-04
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of chicken Liver basic type Fatty Acid Binding Protein
J.BIOMOL.NMR, 25, 2003
6BS1
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BU of 6bs1 by Molmil
Crystal Structure of Human DNA polymerase kappa in complex with DNA containing the major cisplatin lesion
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, Cisplatin, DNA (5'-D(*TP*AP*CP*TP*GP*GP*TP*AP*TP*GP*TP*AP*T)-3'), ...
Authors:Jha, V.K, Ling, H.
Deposit date:2017-12-01
Release date:2018-08-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structural Basis for Human DNA Polymerase Kappa to Bypass Cisplatin Intrastrand Cross-Link (Pt-GG) Lesion as an Efficient and Accurate Extender.
J. Mol. Biol., 430, 2018
6BRX
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BU of 6brx by Molmil
Crystal Structure of Human DNA polymerase kappa in complex with DNA containing the major cisplatin lesion
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, Cisplatin, DI(HYDROXYETHYL)ETHER, ...
Authors:Jha, V.K, Ling, H.
Deposit date:2017-12-01
Release date:2018-08-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Basis for Human DNA Polymerase Kappa to Bypass Cisplatin Intrastrand Cross-Link (Pt-GG) Lesion as an Efficient and Accurate Extender.
J. Mol. Biol., 430, 2018
6CST
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BU of 6cst by Molmil
Structure of human DNA polymerase kappa with DNA
Descriptor: 1,2-ETHANEDIOL, 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, CHLORIDE ION, ...
Authors:Jha, V, Ling, H.
Deposit date:2018-03-21
Release date:2019-01-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:2.0 angstrom resolution crystal structure of human pol kappa reveals a new catalytic function of N-clasp in DNA replication.
Sci Rep, 8, 2018
2IO4
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BU of 2io4 by Molmil
Crystal structure of PCNA12 dimer from Sulfolobus solfataricus.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, DNA polymerase sliding clamp B, ...
Authors:Hlinkova, V, Ling, H.
Deposit date:2006-10-09
Release date:2008-04-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of monomeric, dimeric and trimeric PCNA: PCNA-ring assembly and opening.
Acta Crystallogr.,Sect.D, 64, 2008
2IJX
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BU of 2ijx by Molmil
Crystal structure of PCNA3 monomer from Sulfolobus solfataricus.
Descriptor: 1,2-ETHANEDIOL, DNA polymerase sliding clamp A
Authors:Hlinkova, V, Ling, H.
Deposit date:2006-10-01
Release date:2007-10-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of monomeric, dimeric and trimeric PCNA: PCNA-ring assembly and opening.
Acta Crystallogr.,Sect.D, 64, 2008
3SVD
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BU of 3svd by Molmil
Engineered medium-affinity halide-binding protein derived from YFP: bromide complex
Descriptor: 1,2-ETHANEDIOL, BROMIDE ION, Green fluorescent protein
Authors:Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W.
Deposit date:2011-07-12
Release date:2012-07-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Determination of engineered chloride-binding site structures in fluorescent proteins reveals principles of halide recognition
To be Published
2AF4
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BU of 2af4 by Molmil
Phosphotransacetylase from Methanosarcina thermophila co-crystallized with coenzyme A
Descriptor: COENZYME A, Phosphate acetyltransferase
Authors:Lawrence, S.H, Luther, K.B, Ferry, J.G, Schindelin, H.
Deposit date:2005-07-25
Release date:2006-01-24
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.147 Å)
Cite:Structural and functional studies suggest a catalytic mechanism for the phosphotransacetylase from Methanosarcina thermophila.
J.Bacteriol., 188, 2006
4PD1
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BU of 4pd1 by Molmil
Structure of gephyrin E domain with Glycine-beta receptor peptide
Descriptor: ACETATE ION, GLYCEROL, Gephyrin, ...
Authors:Kasaragod, V.B, Maric, H.M, Schindelin, H.
Deposit date:2014-04-17
Release date:2014-08-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.975 Å)
Cite:Modulation of gephyrin-glycine receptor affinity by multivalency.
Acs Chem.Biol., 9, 2014
3SV5
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BU of 3sv5 by Molmil
Engineered medium-affinity halide-binding protein derived from YFP: iodide complex
Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, Green fluorescent protein, ...
Authors:Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W.
Deposit date:2011-07-12
Release date:2012-07-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Visualization of Synaptic Inhibition with an Optogenetic Sensor Developed by Cell-Free Protein Engineering Automation.
J.Neurosci., 33, 2013
2HBB
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BU of 2hbb by Molmil
Crystal Structure of the N-terminal Domain of Ribosomal Protein L9 (NTL9)
Descriptor: 50S ribosomal protein L9, ZINC ION
Authors:Cho, J.-H, Kim, E.Y, Schindelin, H, Raleigh, D.P.
Deposit date:2006-06-14
Release date:2007-05-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Energetically significant networks of coupled interactions within an unfolded protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
5W2C
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BU of 5w2c by Molmil
Structure of human DNA polymerase kappa in complex with Lucidin-derived DNA adduct and incoming dAMPNPP
Descriptor: 1,2-ETHANEDIOL, 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, DI(HYDROXYETHYL)ETHER, ...
Authors:Jha, V.K, Ling, H.
Deposit date:2017-06-06
Release date:2017-10-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Mechanism of Error-Free DNA Replication Past Lucidin-Derived DNA Damage by Human DNA Polymerase kappa.
Chem. Res. Toxicol., 30, 2017
2C0F
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BU of 2c0f by Molmil
Structure of Wind Y53F mutant
Descriptor: WINDBEUTEL PROTEIN
Authors:Sevvana, M, Ma, Q, Barnewitz, K, Guo, C, Soling, H.-D, Ferrari, D.M, Sheldrick, G.M.
Deposit date:2005-09-02
Release date:2006-08-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Structural Elucidation of the Pdi-Related Chaperone Wind with the Help of Mutants.
Acta Crystallogr.,Sect.D, 62, 2006
1NVJ
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BU of 1nvj by Molmil
Deletion Mutant (Delta 141) of Molybdopterin Synthase
Descriptor: FORMIC ACID, GLYCEROL, Molybdopterin converting factor subunit 2, ...
Authors:Rudolph, M.J, Wuebbens, M.M, Turque, O, Rajagopalan, K.V, Schindelin, H.
Deposit date:2003-02-03
Release date:2003-05-06
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural Studies of Molybdopterin Synthase Provide Insights into its Catalytic Mechanism
J.Biol.Chem., 278, 2003
2C0G
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BU of 2c0g by Molmil
Structure of PDI-related Chaperone, Wind mutant-Y53S
Descriptor: CHLORIDE ION, SODIUM ION, WINDBEUTEL PROTEIN
Authors:Sevvana, M, Ma, Q, Barnewitz, K, Guo, C, Soling, H.-D, Ferrari, D.M, Sheldrick, G.M.
Deposit date:2005-09-02
Release date:2006-08-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural Elucidation of the Pdi-Related Chaperone Wind with the Help of Mutants.
Acta Crystallogr.,Sect.D, 62, 2006
5W2A
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BU of 5w2a by Molmil
Structure of human DNA polymerase kappa in complex with Lucidin-derived DNA adduct and incoming dCMPNPP
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, DNA (5'-D(*AP*TP*GP*(LDG)P*CP*TP*GP*AP*TP*CP*CP*GP*C)-3'), DNA (5'-D(P*GP*CP*GP*GP*AP*TP*CP*AP*G)-3'), ...
Authors:Jha, V.K, Ling, H.
Deposit date:2017-06-06
Release date:2017-10-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Mechanism of Error-Free DNA Replication Past Lucidin-Derived DNA Damage by Human DNA Polymerase kappa.
Chem. Res. Toxicol., 30, 2017
2C0E
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BU of 2c0e by Molmil
Structure of PDI-related Chaperone, Wind with his-tag on C-terminus.
Descriptor: WINDBEUTEL PROTEIN
Authors:Sevvana, M, Ma, Q, Barnewitz, K, Guo, C, Soling, H.-D, Ferrari, D.M, Sheldrick, G.M.
Deposit date:2005-09-01
Release date:2006-08-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural Elucidation of the Pdi-Related Chaperone Wind with the Help of Mutants.
Acta Crystallogr.,Sect.D, 62, 2006
2HBA
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BU of 2hba by Molmil
Crystal Structure of N-terminal Domain of Ribosomal Protein L9 (NTL9) K12M
Descriptor: 50S ribosomal protein L9, CHLORIDE ION, IMIDAZOLE, ...
Authors:Cho, J.-H, Kim, E.Y, Schindelin, H, Raleigh, D.P.
Deposit date:2006-06-14
Release date:2007-05-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Energetically significant networks of coupled interactions within an unfolded protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
2AF3
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BU of 2af3 by Molmil
Phosphotransacetylase from Methanosarcina thermophila soaked with Coenzyme A
Descriptor: COENZYME A, Phosphate acetyltransferase, SULFATE ION
Authors:Lawrence, S.H, Luther, K.B, Ferry, J.G, Schindelin, H.
Deposit date:2005-07-25
Release date:2006-01-24
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and functional studies suggest a catalytic mechanism for the phosphotransacetylase from Methanosarcina thermophila.
J.Bacteriol., 188, 2006
2C1Y
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BU of 2c1y by Molmil
Structure of PDI-related Chaperone, Wind mutant-Y55K
Descriptor: WINDBEUTEL PROTEIN
Authors:Sevvana, M, Ma, Q, Barnewitz, K, Guo, C, Soling, H.-D, Ferrari, D.M, Sheldrick, G.M.
Deposit date:2005-09-22
Release date:2006-08-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural Elucidation of the Pdi-Related Chaperone Wind with the Help of Mutants.
Acta Crystallogr.,Sect.D, 62, 2006
1NVI
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BU of 1nvi by Molmil
Orthorhombic Crystal Form of Molybdopterin Synthase
Descriptor: GLYCEROL, Molybdopterin converting factor subunit 1, Molybdopterin converting factor subunit 2, ...
Authors:Rudolph, M.J, Wuebbens, M.M, Turque, O, Rajagopalan, K.V, Schindelin, H.
Deposit date:2003-02-03
Release date:2003-05-06
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Studies of Molybdopterin Synthase Provide Insights into its Catalytic Mechanism
J.Biol.Chem., 278, 2003
3TIW
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BU of 3tiw by Molmil
Crystal structure of p97N in complex with the C-terminus of gp78
Descriptor: CHLORIDE ION, E3 ubiquitin-protein ligase AMFR, Transitional endoplasmic reticulum ATPase
Authors:Haenzelmann, P, Schindelin, H.
Deposit date:2011-08-22
Release date:2011-09-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.802 Å)
Cite:The Structural and Functional Basis of the p97/Valosin-containing Protein (VCP)-interacting Motif (VIM): MUTUALLY EXCLUSIVE BINDING OF COFACTORS TO THE N-TERMINAL DOMAIN OF p97.
J.Biol.Chem., 286, 2011

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PDB entries from 2024-08-28

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