Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
0MK
0MK
Name:beta-L-ribopyranose
Formula:C5 H10 O5
SMILES:C1(O)C(O)C(O)C(CO1)O
InChi:InChI=1S/C5H10O5/c6-2-1-10-5(9)4(8)3(2)7/h2-9H,1H2/t2-,3-,4-,5-/m0/s1
Synonyms:beta-L-ribose
Definition date:2012-03-01
Last modified:2020-07-17
Release date:2013-03-20
Identifier:beta-L-ribopyranose
OTU
OTU
Name:3-O-alpha-D-glucopyranosyl-D-fructose
Formula:C12 H22 O11
SMILES:O=C(C(OC1OC(C(O)C(O)C1O)CO)C(O)C(O)CO)CO
InChi:InChI=1S/C12H22O11/c13-1-4(16)7(18)11(5(17)2-14)23-12-10(21)9(20)8(19)6(3-15)22-12/h4,6-16,18-21H,1-3H2/t4-,6-,7-,8-,9+,10-,11-,12-/m1/s1
Synonyms:3-O-alpha-D-glucosyl-D-fructose
Definition date:2011-11-01
Last modified:2020-07-17
Identifier:3-O-alpha-D-glucopyranosyl-D-fructose
CJB
CJB
Name:1-beta-D-glucopyranosylpyrimidine-2,4(1H,3H)-dione
Formula:C10 H14 N2 O7
SMILES:O=C1NC(=O)N(C=C1)C2OC(C(O)C(O)C2O)CO
InChi:InChI=1S/C10H14N2O7/c13-3-4-6(15)7(16)8(17)9(19-4)12-2-1-5(14)11-10(12)18/h1-2,4,6-9,13,15-17H,3H2,(H,11,14,18)/t4-,6-,7+,8-,9-/m1/s1
Synonyms:1-D-glucopyranosyl-uracil
Definition date:2007-11-16
Last modified:2020-07-17
Identifier:1-(beta-D-glucopyranosyl)pyrimidine-2,4(1H,3H)-dione
0NZ
0NZ
Name:2-deoxy-6-O-phosphono-beta-D-glucopyranose
Formula:C6 H13 O8 P
SMILES:O=P(O)(O)OCC1OC(O)CC(O)C1O
InChi:InChI=1S/C6H13O8P/c7-3-1-5(8)14-4(6(3)9)2-13-15(10,11)12/h3-9H,1-2H2,(H2,10,11,12)/t3-,4-,5-,6+/m1/s1
Synonyms:2-deoxy-6-O-phosphono-beta-D-arabino-hexopyranose
Definition date:2012-08-17
Last modified:2020-07-17
Release date:2013-06-12
Identifier:2-deoxy-6-O-phosphono-beta-D-arabino-hexopyranose
CKB
CKB
Name:1-beta-D-glucopyranosyl-5-methylpyrimidine-2,4(1H,3H)-dione
Formula:C11 H16 N2 O7
SMILES:O=C1NC(=O)N(C=C1C)C2OC(C(O)C(O)C2O)CO
InChi:InChI=1S/C11H16N2O7/c1-4-2-13(11(19)12-9(4)18)10-8(17)7(16)6(15)5(3-14)20-10/h2,5-8,10,14-17H,3H2,1H3,(H,12,18,19)/t5-,6-,7+,8-,10-/m1/s1
Synonyms:1-D-glucopyranosyl-thymine
Definition date:2007-11-16
Last modified:2020-07-17
Identifier:1-beta-D-glucopyranosyl-5-methylpyrimidine-2,4(1H,3H)-dione
CKP
CKP
Name:6-O-phosphono-beta-D-psicofuranosonic acid
Formula:C6 H11 O10 P
SMILES:O[CH]1[CH](O)[C](O)(O[CH]1CO[P](O)(O)=O)C(O)=O
InChi:InChI=1S/C6H11O10P/c7-3-2(1-15-17(12,13)14)16-6(11,4(3)8)5(9)10/h2-4,7-8,11H,1H2,(H,9,10)(H2,12,13,14)/t2-,3-,4-,6-/m1/s1
Synonyms:(2R,3R,4S,5R)-2,3,4-TRIHYDROXY-5-[(PHOSPHONATOOXY)METHYL]TETRAHYDROFURAN-2-CARBOXYLIC ACID
Definition date:2006-01-19
Last modified:2020-07-17
Identifier:6-O-phosphono-beta-D-psicofuranosonic acid
XDX
XDX
Name:(2R)-2-(alpha-D-glucopyranosyloxy)-3-(phosphonooxy)propanoic acid
Formula:C9 H17 O12 P
SMILES:OP(O)(=O)OCC(C(O)=O)OC1C(C(C(C(O1)CO)O)O)O
InChi:InChI=1S/C9H17O12P/c10-1-3-5(11)6(12)7(13)9(20-3)21-4(8(14)15)2-19-22(16,17)18/h3-7,9-13H,1-2H2,(H,14,15)(H2,16,17,18)/t3-,4-,5-,6+,7-,9-/m1/s1
Synonyms:(2R)-2-(alpha-D-glucosyloxy)-3-(phosphonooxy)propanoic acid
Definition date:2016-05-10
Last modified:2020-07-17
Release date:2017-05-24
Identifier:(2R)-2-(alpha-D-glucopyranosyloxy)-3-(phosphonooxy)propanoic acid
8LM
8LM
Name:2,6-anhydro-3,5-dideoxy-5-[(2-methylpropanoyl)amino]-3-(4-phenyl-1H-1,2,3-triazol-1-yl)-D-glycero-D-galacto-non-2-enoni c acid
Formula:C21 H26 N4 O8
SMILES:C(=O)(NC1C(O)C(=C(C(O)=O)OC1C(C(CO)O)O)n3cc(c2ccccc2)nn3)C(C)C
InChi:InChI=1S/C21H26N4O8/c1-10(2)20(30)22-14-17(29)15(19(21(31)32)33-18(14)16(28)13(27)9-26)25-8-12(23-24-25)11-6-4-3-5-7-11/h3-8,10,13-14,16-18,26-29H,9H2,1-2H3,(H,22,30)(H,31,32)/t13-,14-,16-,17-,18-/m1/s1
Definition date:2017-02-15
Last modified:2020-07-17
Release date:2018-06-27
Identifier:2,6-anhydro-3,5-dideoxy-5-[(2-methylpropanoyl)amino]-3-(4-phenyl-1H-1,2,3-triazol-1-yl)-D-glycero-D-galacto-non-2-enoni c acid
SZZ
SZZ
Name:Sinigrin
Formula:C10 H17 N O9 S2
SMILES:OC[CH]1O[CH](SC(CC=C)=NO[S](O)(=O)=O)[CH](O)[CH](O)[CH]1O
InChi:InChI=1S/C10H17NO9S2/c1-2-3-6(11-20-22(16,17)18)21-10-9(15)8(14)7(13)5(4-12)19-10/h2,5,7-10,12-15H,1,3-4H2,(H,16,17,18)/b11-6+/t5-,7-,8+,9-,10+/m1/s1
Definition date:2016-11-16
Last modified:2020-07-17
Release date:2017-07-05
Identifier:[(2~{S},3~{R},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl] (1~{E})-~{N}-sulfooxybut-3-enimidothioate
8LR
8LR
Name:2-hydroxyethyl alpha-D-mannopyranoside
Formula:C8 H16 O7
SMILES:O(CCO)C1OC(C(O)C(O)C1O)CO
InChi:InChI=1S/C8H16O7/c9-1-2-14-8-7(13)6(12)5(11)4(3-10)15-8/h4-13H,1-3H2/t4-,5-,6+,7+,8+/m1/s1
Synonyms:2-hydroxyethyl alpha-D-mannoside
Definition date:2014-04-22
Last modified:2020-07-17
Release date:2015-04-22
Identifier:2-hydroxyethyl alpha-D-mannopyranoside
OX2
OX2
Name:(1R)-1,5-anhydro-1-(5-methyl-1,3,4-oxadiazol-2-yl)-D-glucitol
Formula:C9 H14 N2 O6
SMILES:OC1C(O)C(O)C(OC1CO)c2nnc(o2)C
InChi:InChI=1S/C9H14N2O6/c1-3-10-11-9(16-3)8-7(15)6(14)5(13)4(2-12)17-8/h4-8,12-15H,2H2,1H3/t4-,5-,6+,7-,8-/m1/s1
Synonyms:2-(BETA-D-GLUCOPYRANOSYL)-5-METHYL-1,3,4-OXADIAZOLE
Definition date:2004-10-05
Last modified:2020-07-17
Identifier:(1R)-1,5-anhydro-1-(5-methyl-1,3,4-oxadiazol-2-yl)-D-glucitol
XGP
XGP
Name:1-O-phosphono-beta-D-glucopyranose
Formula:C6 H13 O9 P
SMILES:O=P(O)(OC1OC(C(O)C(O)C1O)CO)O
InChi:InChI=1S/C6H13O9P/c7-1-2-3(8)4(9)5(10)6(14-2)15-16(11,12)13/h2-10H,1H2,(H2,11,12,13)/t2-,3-,4+,5-,6+/m1/s1
Synonyms:1-O-phosphono-beta-D-glucose
Definition date:2009-10-07
Last modified:2020-07-17
Identifier:1-O-phosphono-beta-D-glucopyranose
CNP
CNP
Name:2-propenyl-N-acetyl-neuraminic acid
Formula:C14 H23 N O8
SMILES:O=C(O)C1(OC(C(O)C(O)CO)C(NC(=O)C)C(O)C1)CC=C
InChi:InChI=1S/C14H23NO8/c1-3-4-14(13(21)22)5-8(18)10(15-7(2)17)12(23-14)11(20)9(19)6-16/h3,8-12,16,18-20H,1,4-6H2,2H3,(H,15,17)(H,21,22)/t8-,9+,10+,11+,12+,14+/m0/s1
Synonyms:2-PROPENYL-N-ACETYL-NEURAMIC ACID
Definition date:1999-07-08
Last modified:2020-07-17
Identifier:5-(acetylamino)-2,6-anhydro-3,5-dideoxy-2-prop-2-en-1-yl-D-erythro-L-manno-nononic acid
XIL
XIL
Name:(3S,4R)-3-hydroxy-2-oxopiperidin-4-yl beta-D-xylopyranoside
Formula:C10 H17 N O7
SMILES:O=C2NCCC(OC1OCC(O)C(O)C1O)C2O
InChi:InChI=1S/C10H17NO7/c12-4-3-17-10(8(15)6(4)13)18-5-1-2-11-9(16)7(5)14/h4-8,10,12-15H,1-3H2,(H,11,16)/t4-,5-,6+,7+,8-,10+/m1/s1
Synonyms:3-HYDROXY-4-(3,4,5-TRIHYDROXY-TETRAHYDRO-PYRAN-2-YLOXY)-PIPERIDIN-2-ONE
Definition date:2002-10-28
Last modified:2020-07-17
Identifier:(3S,4R)-3-hydroxy-2-oxopiperidin-4-yl beta-D-xylopyranoside
8OQ
8OQ
Name:alpha-D-aceric acid
Formula:C6 H10 O6
SMILES:C[CH]1O[CH](O)[CH](O)[C]1(O)C(O)=O
InChi:InChI=1S/C6H10O6/c1-2-6(11,5(9)10)3(7)4(8)12-2/h2-4,7-8,11H,1H3,(H,9,10)/t2-,3+,4+,6+/m1/s1
Definition date:2017-02-14
Last modified:2020-07-17
Release date:2017-03-22
Identifier:(2~{R},3~{R},4~{R},5~{S})-2-methyl-3,4,5-tris(oxidanyl)oxolane-3-carboxylic acid
8PK
8PK
Name:4-O-[(1R)-1-hydroxyethyl]-2-O-methyl-alpha-L-fucopyranose
Formula:C9 H18 O6
SMILES:CO[CH]1[CH](O)O[CH](C)[CH](O[CH](C)O)[CH]1O
InChi:InChI=1S/C9H18O6/c1-4-7(15-5(2)10)6(11)8(13-3)9(12)14-4/h4-12H,1-3H3/t4-,5+,6+,7+,8-,9+/m0/s1
Synonyms:2-O-methyl, 4-O-Acetyl-alpha-L-fucosepyranose
Definition date:2017-02-18
Last modified:2020-07-17
Release date:2017-03-22
Identifier:(2~{R},3~{S},4~{R},5~{S},6~{S})-3-methoxy-6-methyl-5-[(1~{R})-1-oxidanylethoxy]oxane-2,4-diol
XLF
XLF
Name:beta-D-xylulofuranose
Formula:C5 H10 O5
SMILES:OCC1(O)OCC(O)C1O
InChi:InChI=1S/C5H10O5/c6-2-5(9)4(8)3(7)1-10-5/h3-4,6-9H,1-2H2/t3-,4+,5-/m1/s1
Synonyms:beta-D-xylulose
Definition date:2008-04-18
Last modified:2020-07-17
Identifier:beta-D-xylulofuranose
XLS
XLS
Name:D-xylose
Formula:C5 H10 O5
SMILES:O=CC(O)C(O)C(O)CO
InChi:InChI=1S/C5H10O5/c6-1-3(8)5(10)4(9)2-7/h1,3-5,7-10H,2H2/t3-,4+,5+/m0/s1
Synonyms:D-XYLOSE (LINEAR FORM)
Definition date:1999-07-08
Last modified:2020-07-17
Identifier:D-xylose
CR1
CR1
Name:N-(methoxycarbonyl)-beta-D-glucopyranosylamine
Formula:C8 H15 N O7
SMILES:O=C(OC)NC1OC(C(O)C(O)C1O)CO
InChi:InChI=1S/C8H15NO7/c1-15-8(14)9-7-6(13)5(12)4(11)3(2-10)16-7/h3-7,10-13H,2H2,1H3,(H,9,14)/t3-,4-,5+,6-,7-/m1/s1
Synonyms:1-DEOXY-1-METHOXYCARBAMIDO-BETA-D-GLUCOPYRANOSE
Definition date:2000-09-15
Last modified:2020-07-17
Identifier:N-(methoxycarbonyl)-beta-D-glucopyranosylamine
XMM
XMM
Name:5-bromo-4-chloro-1H-indol-3-yl alpha-D-mannopyranoside
Formula:C14 H15 Br Cl N O6
SMILES:Brc3ccc2c(c(OC1OC(C(O)C(O)C1O)CO)cn2)c3Cl
InChi:InChI=1S/C14H15BrClNO6/c15-5-1-2-6-9(10(5)16)7(3-17-6)22-14-13(21)12(20)11(19)8(4-18)23-14/h1-3,8,11-14,17-21H,4H2/t8-,11-,12+,13+,14+/m1/s1
Synonyms:(2R,3S,4S,5S,6R)-2-(5-BROMO-4-CHLORO-1H-INDOL-3-YLOXY)-TETRAHYDRO-6-(HYDROXYMETHYL)-2H-PYRAN-3,4,5-TRIOL
Definition date:2005-04-26
Last modified:2020-07-17
Identifier:5-bromo-4-chloro-1H-indol-3-yl alpha-D-mannopyranoside
CR6
CR6
Name:1-DEOXY-1-ACETYLAMINO-BETA-D-GLUCO-2-HEPTULOPYRANOSONAMIDE
Formula:C9 H16 N2 O7
SMILES:O=C(NC1(OC(CO)C(O)C(O)C1O)C(=O)N)C
InChi:InChI=1S/C9H16N2O7/c1-3(13)11-9(8(10)17)7(16)6(15)5(14)4(2-12)18-9/h4-7,12,14-16H,2H2,1H3,(H2,10,17)(H,11,13)/t4-,5-,6+,7-,9+/m1/s1
Definition date:2000-09-15
Last modified:2020-07-17
Identifier:(2S,3R,4S,5S,6R)-2-(acetylamino)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-carboxamide (non-preferred name)
CRA
CRA
Name:1-DEOXY-1-METHOXYCARBAMIDO-BETA-D-GLUCO-2-HEPTULOPYRANOSONAMIDE
Formula:C9 H16 N2 O8
SMILES:O=C(OC)NC1(OC(CO)C(O)C(O)C1O)C(=O)N
InChi:InChI=1S/C9H16N2O8/c1-18-8(17)11-9(7(10)16)6(15)5(14)4(13)3(2-12)19-9/h3-6,12-15H,2H2,1H3,(H2,10,16)(H,11,17)/t3-,4-,5+,6-,9+/m1/s1
Definition date:1999-07-08
Last modified:2020-07-17
Identifier:methyl [(2S,3R,4S,5S,6R)-2-carbamoyl-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl]carbamate (non-preferred name)
8S0
8S0
Name:L-glucono-1,5-lactone
Formula:C6 H10 O6
SMILES:OC[CH]1OC(=O)[CH](O)[CH](O)[CH]1O
InChi:InChI=1S/C6H10O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-5,7-10H,1H2/t2-,3-,4+,5-/m0/s1
Synonyms:(3~{S},4~{R},5~{R},6~{S})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-one
Definition date:2017-09-07
Last modified:2020-07-17
Release date:2018-05-23
Identifier:(3~{S},4~{R},5~{R},6~{S})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-one
0WK
0WK
Name:1,5-anhydro-6-O-phosphono-D-glucitol
Formula:C6 H13 O8 P
SMILES:O=P(O)(O)OCC1OCC(O)C(O)C1O
InChi:InChI=1S/C6H13O8P/c7-3-1-13-4(6(9)5(3)8)2-14-15(10,11)12/h3-9H,1-2H2,(H2,10,11,12)/t3-,4+,5+,6+/m0/s1
Definition date:2012-07-24
Last modified:2020-07-17
Release date:2013-07-03
Identifier:1,5-anhydro-6-O-phosphono-D-glucitol
T68
T68
Name:N-[(pyridin-2-ylcarbonyl)carbamoyl]-beta-D-glucopyranosylamine
Formula:C13 H17 N3 O7
SMILES:O=C(NC1OC(C(O)C(O)C1O)CO)NC(=O)c2ncccc2
InChi:InChI=1S/C13H17N3O7/c17-5-7-8(18)9(19)10(20)12(23-7)16-13(22)15-11(21)6-3-1-2-4-14-6/h1-4,7-10,12,17-20H,5H2,(H2,15,16,21,22)/t7-,8-,9+,10-,12-/m1/s1
Synonyms:N-[(pyridin-2-ylcarbonyl)carbamoyl]-beta-D-glucosylamine
Definition date:2012-11-22
Last modified:2020-07-17
Release date:2013-12-11
Identifier:N-[(pyridin-2-ylcarbonyl)carbamoyl]-beta-D-glucopyranosylamine

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon