Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
4N2
4N2
Name:beta-L-idopyranose
Formula:C6 H12 O6
SMILES:C1(OC(C(C(C1O)O)O)CO)O
InChi:InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3+,4-,5+,6-/m0/s1
Synonyms:beta-L-idose
Definition date:2016-03-21
Last modified:2020-07-17
Release date:2016-06-08
Identifier:beta-L-idopyranose
EMZ
EMZ
Name:6-O-methyl-beta-D-galactopyranose
Formula:C7 H14 O6
SMILES:COC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
InChi:InChI=1S/C7H14O6/c1-12-2-3-4(8)5(9)6(10)7(11)13-3/h3-11H,2H2,1H3/t3-,4+,5+,6-,7-/m1/s1
Synonyms:6-O-Methyl-D-galactopyranose
Definition date:2018-04-02
Last modified:2020-07-17
Release date:2018-11-21
Identifier:(2~{R},3~{R},4~{S},5~{R},6~{R})-6-(methoxymethyl)oxane-2,3,4,5-tetrol
64K
64K
Name:alpha-D-arabinopyranose
Formula:C5 H10 O5
SMILES:OC1C(OCC(C1O)O)O
InChi:InChI=1S/C5H10O5/c6-2-1-10-5(9)4(8)3(2)7/h2-9H,1H2/t2-,3-,4+,5+/m1/s1
Synonyms:alpha-D-arabinose
Definition date:2016-01-25
Last modified:2020-07-17
Release date:2016-03-02
Identifier:alpha-D-arabinopyranose
EPG
EPG
Name:(2R)-oxiran-2-ylmethyl alpha-D-glucopyranoside
Formula:C9 H16 O7
SMILES:O(CC1OC1)C2OC(C(O)C(O)C2O)CO
InChi:InChI=1S/C9H16O7/c10-1-5-6(11)7(12)8(13)9(16-5)15-3-4-2-14-4/h4-13H,1-3H2/t4-,5-,6-,7+,8-,9+/m1/s1
Synonyms:2-HYDROXYMETHYL-6-OXIRANYLMETHOXY-TETRAHYDRO-PYRAN-3,4,5-TRIOL
Definition date:2002-11-28
Last modified:2020-07-17
Identifier:(2R)-oxiran-2-ylmethyl alpha-D-glucopyranoside
66O
66O
Name:alpha-L-6-dexoy-gulopyranose
Formula:C6 H12 O5
SMILES:C1(C(C(C(O)C(C)O1)O)O)O
InChi:InChI=1S/C6H12O5/c1-2-3(7)4(8)5(9)6(10)11-2/h2-10H,1H3/t2-,3+,4-,5-,6+/m0/s1
Synonyms:alpha-L-6-dexoy-gulose
Definition date:2016-02-04
Last modified:2020-07-17
Release date:2020-07-29
Identifier:6-deoxy-alpha-L-gulopyranose
6BG
6BG
Name:6-bromo-6-deoxy-beta-D-glucopyranose
Formula:C6 H11 Br O5
SMILES:BrCC1OC(O)C(O)C(O)C1O
InChi:InChI=1S/C6H11BrO5/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-6,8-11H,1H2/t2-,3-,4+,5-,6-/m1/s1
Synonyms:6-bromo-6-deoxy-beta-D-glucose
Definition date:2012-08-08
Last modified:2020-07-17
Release date:2012-10-12
Identifier:6-bromo-6-deoxy-beta-D-glucopyranose
6DM
6DM
Name:6-O-alpha-D-mannopyranosyl-alpha-D-mannopyranose
Formula:C12 H22 O11
SMILES:C(C1C(O)C(O)C(O)C(O1)O)OC2C(C(O)C(C(O2)CO)O)O
InChi:InChI=1S/C12H22O11/c13-1-3-5(14)8(17)10(19)12(23-3)21-2-4-6(15)7(16)9(18)11(20)22-4/h3-20H,1-2H2/t3-,4-,5-,6-,7+,8+,9+,10+,11+,12+/m1/s1
Synonyms:alpha 1,6 mannobiose
Definition date:2016-02-19
Last modified:2020-07-17
Release date:2016-12-21
Identifier:6-O-alpha-D-mannopyranosyl-alpha-D-mannopyranose
LXC
LXC
Name:beta-L-xylopyranose
Formula:C5 H10 O5
SMILES:OC1C(O)COC(O)C1O
InChi:InChI=1S/C5H10O5/c6-2-1-10-5(9)4(8)3(2)7/h2-9H,1H2/t2-,3+,4-,5-/m0/s1
Synonyms:beta-L-xylose
Definition date:2002-03-13
Last modified:2020-07-17
Identifier:beta-L-xylopyranose
6GB
6GB
Name:6-O-(6-O-phosphono-beta-D-glucopyranosyl)-beta-D-glucopyranose
Formula:C12 H23 O14 P
SMILES:O=P(O)(O)OCC2OC(OCC1OC(O)C(O)C(O)C1O)C(O)C(O)C2O
InChi:InChI=1S/C12H23O14P/c13-5-3(25-11(19)9(17)7(5)15)1-23-12-10(18)8(16)6(14)4(26-12)2-24-27(20,21)22/h3-19H,1-2H2,(H2,20,21,22)/t3-,4-,5-,6-,7+,8+,9-,10-,11-,12-/m1/s1
Synonyms:gentiobiose 6-phosphate
Definition date:2012-08-24
Last modified:2020-07-17
Release date:2012-09-28
Identifier:6-O-(6-O-phosphono-beta-D-glucopyranosyl)-beta-D-glucopyranose
M55
M55
Name:benzyl alpha-D-glucopyranuronate
Formula:C13 H16 O7
SMILES:O[CH]1O[CH]([CH](O)[CH](O)[CH]1O)C(=O)OCc2ccccc2
InChi:InChI=1S/C13H16O7/c14-8-9(15)11(20-12(17)10(8)16)13(18)19-6-7-4-2-1-3-5-7/h1-5,8-12,14-17H,6H2/t8-,9-,10+,11-,12-/m0/s1
Synonyms:Benzyl D-glucuronoate
Definition date:2019-10-03
Last modified:2020-07-17
Release date:2019-11-27
Identifier:(phenylmethyl) (2~{S},3~{S},4~{S},5~{R},6~{S})-3,4,5,6-tetrakis(oxidanyl)oxane-2-carboxylate
5GF
5GF
Name:5-fluoro-beta-D-glucopyranose
Formula:C6 H11 F O6
SMILES:FC1(OC(O)C(O)C(O)C1O)CO
InChi:InChI=1S/C6H11FO6/c7-6(1-8)4(11)2(9)3(10)5(12)13-6/h2-5,8-12H,1H2/t2-,3-,4+,5-,6-/m1/s1
Synonyms:5-fluoro-beta-D-glucose
Definition date:2012-09-09
Last modified:2020-07-17
Release date:2012-11-09
Identifier:(2R,3R,4R,5S,6S)-6-fluoro-6-(hydroxymethyl)tetrahydro-2H-pyran-2,3,4,5-tetrol (non-preferred name)
M6D
M6D
Name:6-O-phosphono-beta-D-mannopyranose
Formula:C6 H13 O9 P
SMILES:O=P(O)(O)OCC1OC(O)C(O)C(O)C1O
InChi:InChI=1S/C6H13O9P/c7-3-2(1-14-16(11,12)13)15-6(10)5(9)4(3)8/h2-10H,1H2,(H2,11,12,13)/t2-,3-,4+,5+,6-/m1/s1
Synonyms:beta-D-mannose-6-phosphate
Definition date:2007-11-21
Last modified:2020-07-17
Identifier:6-O-phosphono-beta-D-mannopyranose
M6P
M6P
Name:6-O-phosphono-alpha-D-mannopyranose
Formula:C6 H13 O9 P
SMILES:O=P(O)(O)OCC1OC(O)C(O)C(O)C1O
InChi:InChI=1S/C6H13O9P/c7-3-2(1-14-16(11,12)13)15-6(10)5(9)4(3)8/h2-10H,1H2,(H2,11,12,13)/t2-,3-,4+,5+,6+/m1/s1
Synonyms:ALPHA-D-MANNOSE-6-PHOSPHATE
Definition date:1999-07-08
Last modified:2020-07-17
Identifier:6-O-phosphono-alpha-D-mannopyranose
M7B
M7B
Name:7-O-phosphono-D-glycero-beta-D-manno-heptopyranose
Formula:C7 H15 O10 P
SMILES:O=P(O)(O)OCC(O)C1OC(O)C(O)C(O)C1O
InChi:InChI=1S/C7H15O10P/c8-2(1-16-18(13,14)15)6-4(10)3(9)5(11)7(12)17-6/h2-12H,1H2,(H2,13,14,15)/t2-,3+,4+,5+,6-,7-/m1/s1
Synonyms:7-O-phosphono-D-glycero-beta-D-manno-heptose
Definition date:2012-04-04
Last modified:2020-07-17
Release date:2012-12-21
Identifier:7-O-phosphono-D-glycero-beta-D-manno-heptopyranose
M7P
M7P
Name:7-O-phosphono-D-glycero-alpha-D-manno-heptopyranose
Formula:C7 H15 O10 P
SMILES:O=P(O)(O)OCC(O)C1OC(O)C(O)C(O)C1O
InChi:InChI=1S/C7H15O10P/c8-2(1-16-18(13,14)15)6-4(10)3(9)5(11)7(12)17-6/h2-12H,1H2,(H2,13,14,15)/t2-,3+,4+,5+,6-,7+/m1/s1
Synonyms:D-GLYCERO-D-MANNOPYRANOSE-7-PHOSPHATE
Definition date:2004-08-20
Last modified:2020-07-17
Identifier:7-O-phosphono-D-glycero-alpha-D-manno-heptopyranose
5L2
5L2
Name:methyl (2S,4R)-1-[(2S,3R,4R,5S,6S)-6-(acetyloxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]sulfonyl-4-sulfamoyloxy-pyrrolidine-2-carb oxylate
Formula:C14 H24 N2 O13 S2
SMILES:C1(C(C(C(C(COC(=O)C)O1)O)O)O)S(=O)(=O)N2CC(OS(=O)(=O)N)CC2C(=O)OC
InChi:InChI=1S/C14H24N2O13S2/c1-6(17)27-5-9-10(18)11(19)12(20)14(28-9)30(22,23)16-4-7(29-31(15,24)25)3-8(16)13(21)26-2/h7-12,14,18-20H,3-5H2,1-2H3,(H2,15,24,25)/t7-,8+,9+,10-,11-,12-,14+/m1/s1
Definition date:2015-10-16
Last modified:2020-07-17
Release date:2015-10-28
Identifier:methyl (2S,4R)-1-({(2S,3R,4R,5S,6S)-6-[(acetyloxy)methyl]-3,4,5-trihydroxytetrahydro-2H-pyran-2-yl}sulfonyl)-4-(sulfamoyloxy)py rrolidine-2-carboxylate (non-preferred name)
6PZ
6PZ
Name:5,7-bisacetamido-3,5,7,9-tetradeoxy-L-glycero-alpha-L-manno-non-2-ulopyranosonic acid
Formula:C13 H22 N2 O8
SMILES:C[CH](O)[CH](NC(C)=O)[CH]1O[C](O)(C[CH](O)[CH]1NC(C)=O)C(O)=O
InChi:InChI=1S/C13H22N2O8/c1-5(16)9(14-6(2)17)11-10(15-7(3)18)8(19)4-13(22,23-11)12(20)21/h5,8-11,16,19,22H,4H2,1-3H3,(H,14,17)(H,15,18)(H,20,21)/t5-,8-,9-,10-,11-,13-/m0/s1
Synonyms:(2~{S},4~{S},5~{S},6~{S})-5-acetamido-6-[(1~{S},2~{S})-1-acetamido-2-oxidanyl-propyl]-2,4-bis(oxidanyl)oxane-2-carboxyl ic acid
Definition date:2016-05-19
Last modified:2020-07-17
Release date:2017-03-08
Identifier:(2~{S},4~{S},5~{S},6~{S})-5-acetamido-6-[(1~{S},2~{S})-1-acetamido-2-oxidanyl-propyl]-2,4-bis(oxidanyl)oxane-2-carboxyl ic acid
6UD
6UD
Name:5-acetamido-2,6-anhydro-3,5,9-trideoxy-9-triazan-1-yl-D-glycero-D-galacto-non-2-enonic acid
Formula:C11 H20 N4 O7
SMILES:C(C=1OC(C(C(C=1)O)NC(=O)C)C(C(O)CNNN)O)(=O)O
InChi:InChI=1S/C11H20N4O7/c1-4(16)14-8-5(17)2-7(11(20)21)22-10(8)9(19)6(18)3-13-15-12/h2,5-6,8-10,13,15,17-19H,3,12H2,1H3,(H,14,16)(H,20,21)/t5-,6+,8+,9+,10+/m0/s1
Synonyms:(2~{R},3~{R},4~{S})-3-acetamido-2-[(1~{R},2~{R})-3-(2-azanylhydrazinyl)-1,2-bis(oxidanyl)propyl]-4-oxidanyl-3,4-dihydro -2~{H}-pyran-6-carboxylic acid
Definition date:2016-06-27
Last modified:2020-07-17
Release date:2017-06-28
Identifier:5-(acetylamino)-2,6-anhydro-3,5,9-trideoxy-9-triazan-1-yl-D-glycero-D-galacto-non-2-enonic acid
MTT
MTT
Name:MALTOTETRAOSE
Formula:C24 H42 O21
SMILES:O(C2C(OC(OC1C(O)C(O)C(O)OC1CO)C(O)C2O)CO)C4OC(C(OC3OC(CO)C(O)C(O)C3O)C(O)C4O)CO
InChi:InChI=1S/C24H42O21/c25-1-5-9(29)10(30)15(35)22(40-5)44-19-7(3-27)42-24(17(37)12(19)32)45-20-8(4-28)41-23(16(36)13(20)33)43-18-6(2-26)39-21(38)14(34)11(18)31/h5-38H,1-4H2/t5-,6-,7-,8-,9-,10+,11-,12-,13-,14-,15-,16-,17-,18-,19-,20-,21+,22-,23-,24-/m1/s1
Definition date:1999-07-08
Last modified:2020-07-17
Identifier:alpha-D-glucopyranosyl-(1->4)-alpha-D-glucopyranosyl-(1->4)-alpha-D-glucopyranosyl-(1->4)-alpha-D-glucopyranose
3MK
3MK
Name:beta-L-altropyranose
Formula:C6 H12 O6
SMILES:OC1C(O)C(OC(O)C1O)CO
InChi:InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4-,5+,6-/m0/s1
Synonyms:beta-L-altrose
Definition date:2010-04-19
Last modified:2020-07-17
Release date:2020-07-29
Identifier:beta-L-altropyranose
NT1
NT1
Name:HEPARIN HEPTASACCHARIDE
Formula:C55 H98 O54 S6
SMILES:O=S(=O)(OCC7OCC(OS(=O)(=O)O)C(OC)C7OC6OC(C(O)O)C(OC5OC(C(OC4OC(C(OC3OC(COS(=O)(=O)O)C(OC2OC(COC)C(OC1OC(CC(OC)C1OC)COC)C(OC)C2OC)C(OC)C3OC)C(OC)C4OC)C(O)O)C(OS(=O)(=O)O)C5OS(=O)(=O)O)COS(=O)(=O)O)C(OC)C6OC)O
InChi:InChI=1S/C55H98O54S6/c1-78-15-21-14-22(80-3)33(82-5)50(95-21)100-30-24(16-79-2)96-51(43(87-10)34(30)83-6)101-31-25(19-93-111(63,64)65)97-52(44(88-11)35(31)84-7)103-38-36(85-8)46(90-13)54(106-41(38)48(56)57)102-32-26(20-94-112(66,67)68)98-55(47(109-115(75,76)77)40(32)108-114(72,73)74)104-39-37(86-9)45(89-12)53(105-42(39)49(58)59)99-29-23(18-92-110(60,61)62)91-17-27(28(29)81-4)107-113(69,70)71/h21-59H,14-20H2,1-13H3,(H,60,61,62)(H,63,64,65)(H,66,67,68)(H,69,70,71)(H,72,73,74)(H,75,76,77)/t21-,22-,23+,24+,25+,26+,27-,28+,29+,30+,31+,32+,33+,34-,35-,36-,37-,38-,39-,40-,41-,42+,43+,44+,45+,46+,47+,50?,51-,52+,53+,54+,55+/m0/s1
Definition date:2004-04-20
Last modified:2020-07-17
Identifier:[(2R,3R,4S,5S)-3-{[(2R,3R,4S,5S,6R)-6-(dihydroxymethyl)-5-({(2R,3R,4S,5R,6R)-5-{[(2R,3R,4S,5S,6S)-6-(dihydroxymethyl)-5-({(2R,3R,4S,5R,6R)-5-{[(2S,3R,4S,5R,6R)-5-{[(2R,3R,4S,6S)-3,4-dimethoxy-6-(methoxymethyl)tetrahydro-2H-pyran-2-yl]oxy}-3,4-dimethoxy-6-(methoxymethyl)tetrahydro-2H-pyran-2-yl]oxy}-3,4-dimethoxy-6-[(sulfooxy)methyl]tetrahydro-2H-pyran-2-yl}oxy)-3,4-dimethoxytetrahydro-2H-pyran-2-yl]oxy}-3,4-bis(sulfooxy)-6-[(sulfooxy)methyl]tetrahydro-2H-pyran-2-yl}oxy)-3,4-dimethoxytetrahydro-2H-pyran-2-yl]oxy}-4-methoxy-5-(sulfooxy)tetrahydro-2H-pyran-2-yl]methyl hydrogen sulfate (non-preferred name)
OTU
OTU
Name:3-O-alpha-D-glucopyranosyl-D-fructose
Formula:C12 H22 O11
SMILES:O=C(C(OC1OC(C(O)C(O)C1O)CO)C(O)C(O)CO)CO
InChi:InChI=1S/C12H22O11/c13-1-4(16)7(18)11(5(17)2-14)23-12-10(21)9(20)8(19)6(3-15)22-12/h4,6-16,18-21H,1-3H2/t4-,6-,7-,8-,9+,10-,11-,12-/m1/s1
Synonyms:3-O-alpha-D-glucosyl-D-fructose
Definition date:2011-11-01
Last modified:2020-07-17
Identifier:3-O-alpha-D-glucopyranosyl-D-fructose
AGR
AGR
Name:[(2R,3S,4S,5S)-2,5-bis(hydroxymethyl)-5-[(2R,3R,4R,5R,6R)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-4-oxidany l-oxolan-3-yl] [(2R,3R,4S,5S)-2,4,5-tris(oxidanyl)oxan-3-yl] hydrogen phosphate
Formula:C17 H31 O18 P
SMILES:O=P(OC1C(O)C(O)COC1O)(OC3C(OC(OC2OC(CO)C(O)C(O)C2O)(CO)C3O)CO)O
InChi:InChI=1S/C17H31O18P/c18-1-6-9(23)10(24)11(25)16(31-6)33-17(4-20)14(26)12(7(2-19)32-17)34-36(28,29)35-13-8(22)5(21)3-30-15(13)27/h5-16,18-27H,1-4H2,(H,28,29)/t5-,6+,7+,8-,9-,10+,11+,12+,13+,14-,15+,16+,17-/m0/s1
Synonyms:agrocinopine A
Definition date:2014-03-12
Last modified:2020-07-17
Release date:2015-08-19
Identifier:(2R,3S,4S,5S)-4-hydroxy-2,5-bis(hydroxymethyl)-5-{[(2R,3R,4R,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl]oxy}tetrahydrofuran-3-yl (2R,3R,4S,5S)-2,4,5-trihydroxytetrahydro-2H-pyran-3-yl hydrogen (R)-phosphate (non-preferred name)
AH8
AH8
Name:(2R,3R,4R,5S)-2-azido-5-(hydroxymethyl)oxolane-3,4-diol
Formula:C5 H9 N3 O4
SMILES:[N-]=[N+]=N/C1OC(C(O)C1O)CO
InChi:InChI=1S/C5H9N3O4/c6-8-7-5-4(11)3(10)2(1-9)12-5/h2-5,9-11H,1H2/t2-,3-,4+,5+/m0/s1
Synonyms:(2R,3R,4R,5S)-2-azido-5-(hydroxymethyl)tetrahydrofuran-3,4-diol
Definition date:2010-08-03
Last modified:2020-07-17
Identifier:(2R,3R,4R,5S)-2-azido-5-(hydroxymethyl)tetrahydrofuran-3,4-diol (non-preferred name)
AIG
AIG
Name:hexyl 3-amino-3-deoxy-beta-D-galactopyranoside
Formula:C12 H25 N O5
SMILES:O(CCCCCC)C1OC(C(O)C(N)C1O)CO
InChi:InChI=1S/C12H25NO5/c1-2-3-4-5-6-17-12-11(16)9(13)10(15)8(7-14)18-12/h8-12,14-16H,2-7,13H2,1H3/t8-,9+,10+,11-,12-/m1/s1
Synonyms:4-AMINO-2-HEXYLOXY-6-HYDROXYMETHYL-TETRAHYDRO-PYRAN-3,5-DIOL
Definition date:2003-10-27
Last modified:2020-07-17
Identifier:hexyl 3-amino-3-deoxy-beta-D-galactopyranoside

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon