Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
7CV
7CV
Name:6-deoxy-2,3-di-O-methyl-alpha-L-mannopyranose
Formula:C8 H16 O5
SMILES:C1(O)C(OC)C(C(C(O1)C)O)OC
InChi:InChI=1S/C8H16O5/c1-4-5(9)6(11-2)7(12-3)8(10)13-4/h4-10H,1-3H3/t4-,5-,6+,7+,8+/m0/s1
Synonyms:6-deoxy-2,3-di-O-methyl-alpha-L-mannose
Definition date:2016-10-05
Last modified:2020-07-17
Release date:2017-10-18
Identifier:6-deoxy-2,3-di-O-methyl-alpha-L-mannopyranose
7D1
7D1
Name:1,5-anhydro-2-deoxy-D-arabino-hexitol
Formula:C6 H12 O4
SMILES:OC[CH]1OCC[CH](O)[CH]1O
InChi:InChI=1S/C6H12O4/c7-3-5-6(9)4(8)1-2-10-5/h4-9H,1-3H2/t4-,5-,6+/m1/s1
Synonyms:(2~{R},3~{S},4~{R})-2-(hydroxymethyl)oxane-3,4-diol
Definition date:2016-10-07
Last modified:2020-07-17
Release date:2017-01-11
Identifier:(2~{R},3~{S},4~{R})-2-(hydroxymethyl)oxane-3,4-diol
7GP
7GP
Name:N-[ethoxy(oxo)acetyl]-beta-D-glucopyranosylamine
Formula:C10 H17 N O8
SMILES:O=C(NC1OC(C(O)C(O)C1O)CO)C(=O)OCC
InChi:InChI=1S/C10H17NO8/c1-2-18-10(17)8(16)11-9-7(15)6(14)5(13)4(3-12)19-9/h4-7,9,12-15H,2-3H2,1H3,(H,11,16)/t4-,5-,6+,7-,9-/m1/s1
Synonyms:ETHYL-N-(BETA-D-GLUCOPYRANOSYL)OXAMATE
Definition date:2006-01-25
Last modified:2020-07-17
Identifier:N-[ethoxy(oxo)acetyl]-beta-D-glucopyranosylamine
RAE
RAE
Name:alpha-L-Olivopyranose
Formula:C6 H12 O4
SMILES:OC1C(OC(O)CC1O)C
InChi:InChI=1S/C6H12O4/c1-3-6(9)4(7)2-5(8)10-3/h3-9H,2H2,1H3/t3-,4-,5+,6-/m0/s1
Synonyms:alpha-L-Olivose
Definition date:2002-12-11
Last modified:2020-07-17
Identifier:2,6-dideoxy-alpha-L-arabino-hexopyranose
RAF
RAF
Name:raffinose
Formula:C18 H32 O16
SMILES:O2C(COC1OC(CO)C(O)C(O)C1O)C(O)C(O)C(O)C2OC3(OC(C(O)C3O)CO)CO
InChi:InChI=1S/C18H32O16/c19-1-5-8(22)11(25)13(27)16(31-5)30-3-7-9(23)12(26)14(28)17(32-7)34-18(4-21)15(29)10(24)6(2-20)33-18/h5-17,19-29H,1-4H2/t5-,6-,7-,8+,9-,10-,11+,12+,13-,14-,15+,16+,17-,18+/m1/s1
Definition date:2008-01-28
Last modified:2020-07-17
Identifier:beta-D-fructofuranosyl alpha-D-galactopyranosyl-(1->6)-alpha-D-glucopyranoside
RAM
RAM
Name:alpha-L-rhamnopyranose
Formula:C6 H12 O5
SMILES:OC1C(O)C(OC(O)C1O)C
InChi:InChI=1S/C6H12O5/c1-2-3(7)4(8)5(9)6(10)11-2/h2-10H,1H3/t2-,3-,4+,5+,6+/m0/s1
Synonyms:alpha-L-rhamnose
Definition date:1999-07-08
Last modified:2020-07-17
Identifier:6-deoxy-alpha-L-mannopyranose
Q6B
Q6B
Name:[(6~{S},7~{S},9~{Z},12~{R})-12-[(~{Z},2~{S},6~{R},7~{R},9~{R})-4,6-dimethyl-7,9-bis(oxidanyl)dec-4-en-2-yl]-7,9-dimethyl-2-oxidanylidene-1-oxacyclododec-9-en-6-yl] (2~{E},4~{E},6~{E},8~{E},10~{E},12~{S},13~{S},15~{S})-4,6,10-trimethyl-12,13,15-tris(oxidanyl)hexadeca-2,4,6,8,10-pentaenoate
Formula:C44 H70 O9
SMILES:C[CH](O)C[CH](O)[CH](C)C=C(C)C[CH](C)[CH]1CC=C(C)C[CH](C)[CH](CCCC(=O)O1)OC(=O)C=CC(C)=CC(C)=CC=CC(C)=C[CH](O)[CH](O)C[CH](C)O
InChi:InChI=1S/C44H70O9/c1-28(13-11-14-29(2)25-39(48)40(49)27-37(10)46)21-30(3)18-20-44(51)52-41-15-12-16-43(50)53-42(19-17-31(4)22-34(41)7)35(8)24-32(5)23-33(6)38(47)26-36(9)45/h11,13-14,17-18,20-21,23,25,33-42,45-49H,12,15-16,19,22,24,26-27H2,1-10H3/b14-11+,20-18+,28-13+,29-25+,30-21+,31-17-,32-23-/t33-,34+,35+,36-,37+,38-,39+,40+,41+,42-/m1/s1
Definition date:2020-05-22
Last modified:2020-07-17
Release date:2020-07-22
Identifier:[(6~{S},7~{S},9~{Z},12~{R})-12-[(~{Z},2~{S},6~{R},7~{R},9~{R})-4,6-dimethyl-7,9-bis(oxidanyl)dec-4-en-2-yl]-7,9-dimethyl-2-oxidanylidene-1-oxacyclododec-9-en-6-yl] (2~{E},4~{E},6~{E},8~{E},10~{E},12~{S},13~{S},15~{S})-4,6,10-trimethyl-12,13,15-tris(oxidanyl)hexadeca-2,4,6,8,10-pentaenoate
1S3
1S3
Name:(2R,3aR,5R,6S,7S,7aR)-5-(hydroxymethyl)tetrahydro-3aH-[1,3,2]dioxaphospholo[4,5-b]pyran-2,6,7-triol 2-oxide
Formula:C6 H11 O8 P
SMILES:O=P1(OC2C(O)C(O)C(OC2O1)CO)O
InChi:InChI=1S/C6H11O8P/c7-1-2-3(8)4(9)5-6(12-2)14-15(10,11)13-5/h2-9H,1H2,(H,10,11)/t2-,3-,4+,5-,6-/m1/s1
Synonyms:Glucose1,2cyclic phosphate
Definition date:2013-05-15
Last modified:2020-07-17
Release date:2013-12-11
Identifier:(2R,3aR,5R,6S,7S,7aR)-5-(hydroxymethyl)tetrahydro-3aH-[1,3,2]dioxaphospholo[4,5-b]pyran-2,6,7-triol 2-oxide
1SD
1SD
Name:(1S)-1,5-anhydro-1-sulfamoyl-D-galactitol
Formula:C6 H13 N O7 S
SMILES:O=S(=O)(N)C1OC(C(O)C(O)C1O)CO
InChi:InChI=1S/C6H13NO7S/c7-15(12,13)6-5(11)4(10)3(9)2(1-8)14-6/h2-6,8-11H,1H2,(H2,7,12,13)/t2-,3+,4+,5-,6+/m1/s1
Synonyms:(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxane-2-sulfonamide
Definition date:2009-06-02
Last modified:2020-07-17
Identifier:(1S)-1,5-anhydro-1-sulfamoyl-D-galactitol
QCQ
QCQ
Name:[[(2~{R},3~{R},4~{S},5~{R})-5-[2-chloranyl-6-[(phenylmethyl)amino]purin-9-yl]-4-fluoranyl-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]methylphosphonic acid
Formula:C18 H21 Cl F N5 O8 P2
SMILES:O[CH]1[CH](F)[CH](O[CH]1CO[P](O)(=O)C[P](O)(O)=O)n2cnc3c(NCc4ccccc4)nc(Cl)nc23
InChi:InChI=1S/C18H21ClFN5O8P2/c19-18-23-15(21-6-10-4-2-1-3-5-10)13-16(24-18)25(8-22-13)17-12(20)14(26)11(33-17)7-32-35(30,31)9-34(27,28)29/h1-5,8,11-12,14,17,26H,6-7,9H2,(H,30,31)(H,21,23,24)(H2,27,28,29)/t11-,12+,14-,17-/m1/s1
Definition date:2020-06-05
Last modified:2020-07-17
Release date:2020-07-22
Identifier:[[(2~{R},3~{R},4~{S},5~{R})-5-[2-chloranyl-6-[(phenylmethyl)amino]purin-9-yl]-4-fluoranyl-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]methylphosphonic acid
1X4
1X4
Name:2,3-dideoxy-5-O-phosphono-alpha-D-ribofuranose
Formula:C5 H11 O6 P
SMILES:O=P(OCC1OC(O)CC1)(O)O
InChi:InChI=1S/C5H11O6P/c6-5-2-1-4(11-5)3-10-12(7,8)9/h4-6H,1-3H2,(H2,7,8,9)/t4-,5-/m0/s1
Synonyms:2,3-dideoxyribose-5-phosphate
Definition date:2013-07-22
Last modified:2020-07-17
Release date:2013-07-31
Identifier:[(2S,5S)-5-hydroxytetrahydrofuran-2-yl]methyl dihydrogen phosphate
20S
20S
Name:BETA-D-FRUCTOFURANOSYL 6-O-OCTANOYL-ALPHA-D-GLUCOPYRANOSIDE
Formula:C20 H36 O12
SMILES:O=C(OCC2OC(OC1(OC(C(O)C1O)CO)CO)C(O)C(O)C2O)CCCCCCC
InChi:InChI=1S/C20H36O12/c1-2-3-4-5-6-7-13(23)29-9-12-14(24)16(26)17(27)19(30-12)32-20(10-22)18(28)15(25)11(8-21)31-20/h11-12,14-19,21-22,24-28H,2-10H2,1H3/t11-,12-,14-,15-,16+,17-,18+,19-,20+/m1/s1
Definition date:2006-01-05
Last modified:2020-07-17
Identifier:beta-D-fructofuranosyl 6-O-octanoyl-alpha-D-glucopyranoside
QIF
QIF
Name:1-deoxy-7-O-phosphono-alpha-D-gluco-hept-2-ulopyranose
Formula:C7 H15 O9 P
SMILES:C1(C(C(O)C(C(COP(=O)(O)O)O1)O)O)(O)C
InChi:InChI=1S/C7H15O9P/c1-7(11)6(10)5(9)4(8)3(16-7)2-15-17(12,13)14/h3-6,8-11H,2H2,1H3,(H2,12,13,14)/t3-,4-,5+,6-,7+/m1/s1
Synonyms:1-deoxy-7-O-phosphono-alpha-D-gluco-hept-2-ulose
Definition date:2018-11-09
Last modified:2020-07-17
Release date:2019-05-01
Identifier:1-deoxy-7-O-phosphono-alpha-D-gluco-hept-2-ulopyranose
56N
56N
Name:phenyl beta-D-galactopyranoside
Formula:C12 H16 O6
SMILES:OC1C(OC(C(O)C1O)CO)Oc2ccccc2
InChi:InChI=1S/C12H16O6/c13-6-8-9(14)10(15)11(16)12(18-8)17-7-4-2-1-3-5-7/h1-5,8-16H,6H2/t8-,9+,10+,11-,12-/m1/s1
Synonyms:phenyl beta-D-galactoside
Definition date:2015-08-05
Last modified:2020-07-17
Release date:2015-11-25
Identifier:phenyl beta-D-galactopyranoside
RCD
RCD
Name:gamma-cyclodextrin
Formula:C48 H80 O40
SMILES:OC2C(O)C1OC9OC(CO)C(OC8OC(CO)C(OC7OC(CO)C(OC6OC(CO)C(OC5OC(C(OC4OC(CO)C(OC3OC(CO)C(OC2OC1CO)C(O)C3O)C(O)C4O)C(O)C5O)CO)C(O)C6O)C(O)C7O)C(O)C8O)C(O)C9O
InChi:InChI=1S/C48H80O40/c49-1-9-33-17(57)25(65)41(73-9)82-34-10(2-50)75-43(27(67)19(34)59)84-36-12(4-52)77-45(29(69)21(36)61)86-38-14(6-54)79-47(31(71)23(38)63)88-40-16(8-56)80-48(32(72)24(40)64)87-39-15(7-55)78-46(30(70)22(39)62)85-37-13(5-53)76-44(28(68)20(37)60)83-35-11(3-51)74-42(81-33)26(66)18(35)58/h9-72H,1-8H2/t9-,10-,11-,12-,13-,14-,15-,16-,17-,18-,19-,20-,21-,22-,23-,24-,25-,26-,27-,28-,29-,30-,31-,32-,33-,34-,35-,36-,37-,38-,39-,40-,41-,42-,43-,44-,45-,46-,47-,48-/m1/s1
Synonyms:cyclo-octa-amylose
Definition date:2011-02-11
Last modified:2020-07-17
Release date:2015-12-16
Identifier:(1S,3R,5R,6S,8R,10R,11S,13R,15R,16S,18R,20R,21S,23R,25R,26S,28R,30R,31S,33R,35R,36S,38R,40R,41R,42R,43R,44R,45R,46R,47R,48R,49R,50R,51R,52R,53R,54R,55R,56R)-5,10,15,20,25,30,35,40-octakis(hydroxymethyl)-2,4,7,9,12,14,17,19,22,24,27,29,32,34,37,39-hexadecaoxanonacyclo[36.2.2.2~3,6~.2~8,11~.2~13,16~.2~18,21~.2~23,26~.2~28,31~.2~33,36~]hexapentacontane-41,42,43,44,45,46,47,48,49,50,51,52,53,54,55,56-hexadecol (non-preferred name)
57S
57S
Name:4-O-[2-acetamido-2-deoxy-beta-D-glucopyranosyl]-5-O-phosphono-D-ribitol
Formula:C13 H26 N O13 P
SMILES:C1(C(NC(C)=O)C(C(C(O1)CO)O)O)OC(COP(O)(O)=O)C(O)C(CO)O
InChi:InChI=1S/C13H26NO13P/c1-5(17)14-9-12(21)11(20)7(3-16)26-13(9)27-8(4-25-28(22,23)24)10(19)6(18)2-15/h6-13,15-16,18-21H,2-4H2,1H3,(H,14,17)(H2,22,23,24)/t6-,7+,8+,9+,10-,11+,12+,13-/m0/s1
Synonyms:4-O-[2-(acetylamino)-2-deoxy-beta-D-glucopyranosyl]-5-O-phosphono-D-ribitol
Definition date:2015-08-12
Last modified:2020-07-17
Release date:2015-11-11
Identifier:4-O-[2-(acetylamino)-2-deoxy-beta-D-glucopyranosyl]-5-O-phosphono-D-ribitol
RER
RER
Name:vancosamine
Formula:C7 H15 N O3
SMILES:OC1OC(C(O)C(N)(C)C1)C
InChi:InChI=1S/C7H15NO3/c1-4-6(10)7(2,8)3-5(9)11-4/h4-6,9-10H,3,8H2,1-2H3/t4-,5+,6+,7-/m0/s1
Synonyms:(1R,3S,4S,5S)-3-amino-2,3,6-trideoxy-3-methyl-alpha-L-arabino-hexopyranose
Definition date:2010-09-06
Last modified:2020-07-17
Identifier:3-amino-2,3,6-trideoxy-3-methyl-alpha-L-lyxo-hexopyranose
RF5
RF5
Name:2-deoxy-2-fluoro-5-O-phosphono-alpha-D-arabinofuranose
Formula:C5 H10 F O7 P
SMILES:FC1C(O)C(OC1O)COP(=O)(O)O
InChi:InChI=1S/C5H10FO7P/c6-3-4(7)2(13-5(3)8)1-12-14(9,10)11/h2-5,7-8H,1H2,(H2,9,10,11)/t2-,3+,4-,5+/m1/s1
Synonyms:Inhibitor arabinosyl-2-fluoro-2-deoxynicotinamide mononucleotide, bound form
Definition date:2008-07-30
Last modified:2020-07-17
Identifier:2-deoxy-2-fluoro-5-O-phosphono-alpha-D-arabinofuranose
RGG
RGG
Name:(2R)-2,3-dihydroxypropyl beta-D-galactopyranoside
Formula:C9 H18 O8
SMILES:O(CC(O)CO)C1OC(C(O)C(O)C1O)CO
InChi:InChI=1S/C9H18O8/c10-1-4(12)3-16-9-8(15)7(14)6(13)5(2-11)17-9/h4-15H,1-3H2/t4-,5-,6+,7+,8-,9-/m1/s1
Synonyms:(2R)-glyceryl-beta-D-galactopyranoside
Definition date:2009-02-19
Last modified:2020-07-17
Identifier:(2R)-2,3-dihydroxypropyl beta-D-galactopyranoside
RHA
RHA
Name:6-deoxy-1-O-phosphono-alpha-L-rhamnopyranose
Formula:C6 H13 O8 P
SMILES:O=P(OC1OC(C(O)C(O)C1O)C)(O)O
InChi:InChI=1S/C6H13O8P/c1-2-3(7)4(8)5(9)6(13-2)14-15(10,11)12/h2-9H,1H3,(H2,10,11,12)/t2-,3-,4+,5+,6-/m0/s1
Synonyms:6-DEOXY-MANNOSE-1'-PHOSPHATE
Definition date:1999-07-08
Last modified:2020-07-17
Identifier:6-deoxy-1-O-phosphono-alpha-L-mannopyranose
RI2
RI2
Name:1,5-di-O-phosphono-alpha-D-ribofuranose
Formula:C5 H12 O11 P2
SMILES:O=P(O)(O)OCC1OC(OP(=O)(O)O)C(O)C1O
InChi:InChI=1S/C5H12O11P2/c6-3-2(1-14-17(8,9)10)15-5(4(3)7)16-18(11,12)13/h2-7H,1H2,(H2,8,9,10)(H2,11,12,13)/t2-,3-,4-,5-/m1/s1
Synonyms:1,5-di-O-phosphono-alpha-D-ribose
Definition date:2011-01-07
Last modified:2020-07-17
Identifier:1,5-di-O-phosphono-alpha-D-ribofuranose
RIB
RIB
Name:alpha-D-ribofuranose
Formula:C5 H10 O5
SMILES:OC1C(OC(O)C1O)CO
InChi:InChI=1S/C5H10O5/c6-1-2-3(7)4(8)5(9)10-2/h2-9H,1H2/t2-,3-,4-,5+/m1/s1
Synonyms:alpha-D-ribose
Definition date:1999-07-08
Last modified:2020-07-17
Identifier:alpha-D-ribofuranose
RIP
RIP
Name:beta-D-ribopyranose
Formula:C5 H10 O5
SMILES:OC1C(O)COC(O)C1O
InChi:InChI=1S/C5H10O5/c6-2-1-10-5(9)4(8)3(2)7/h2-9H,1H2/t2-,3-,4-,5-/m1/s1
Synonyms:beta-D-ribose
Definition date:1999-07-08
Last modified:2020-07-17
Identifier:beta-D-ribopyranose
5GF
5GF
Name:5-fluoro-beta-D-glucopyranose
Formula:C6 H11 F O6
SMILES:FC1(OC(O)C(O)C(O)C1O)CO
InChi:InChI=1S/C6H11FO6/c7-6(1-8)4(11)2(9)3(10)5(12)13-6/h2-5,8-12H,1H2/t2-,3-,4+,5-,6-/m1/s1
Synonyms:5-fluoro-beta-D-glucose
Definition date:2012-09-09
Last modified:2020-07-17
Release date:2012-11-09
Identifier:(2R,3R,4R,5S,6S)-6-fluoro-6-(hydroxymethyl)tetrahydro-2H-pyran-2,3,4,5-tetrol (non-preferred name)
5GO
5GO
Name:4-O-(3-O-sulfo-beta-D-galactopyranosyl)-beta-D-glucopyranose
Formula:C12 H22 O14 S
SMILES:C1(C(C(C(C(CO)O1)O)OS(=O)(O)=O)O)OC2C(C(C(O)OC2CO)O)O
InChi:InChI=1S/C12H22O14S/c13-1-3-5(15)10(26-27(20,21)22)8(18)12(24-3)25-9-4(2-14)23-11(19)7(17)6(9)16/h3-19H,1-2H2,(H,20,21,22)/t3-,4-,5+,6-,7-,8-,9-,10+,11-,12+/m1/s1
Definition date:2015-09-24
Last modified:2020-07-17
Release date:2016-02-17
Identifier:4-O-(3-O-sulfo-beta-D-galactopyranosyl)-beta-D-glucopyranose

224572

PDB entries from 2024-09-04

PDB statisticsPDBj update infoContact PDBjnumon