Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
L0G
L0G
Name:2-{4-[(CYCLOPROPYLCARBAMOYL)AMINO]-1H-PYRAZOL-3-YL}-6-(MORPHOLIN-4-IUM-4-YLMETHYL)-1H-3,1-BENZIMIDAZOL-3-IUM
Formula:C19 H25 N7 O2
SMILES:O=C(NC1CC1)Nc2cnnc2c4[nH+]c3ccc(cc3n4)C[NH+]5CCOCC5
InChi:InChI=1S/C19H23N7O2/c27-19(21-13-2-3-13)24-16-10-20-25-17(16)18-22-14-4-1-12(9-15(14)23-18)11-26-5-7-28-8-6-26/h1,4,9-10,13H,2-3,5-8,11H2,(H,20,25)(H,22,23)(H2,21,24,27)/p+2
Definition date:2008-10-17
Last modified:2011-06-04
Identifier:2-{4-[(cyclopropylcarbamoyl)amino]-1H-pyrazol-3-yl}-6-(morpholin-4-ium-4-ylmethyl)-1H-3,1-benzimidazol-3-ium
L0I
L0I
Name:4-[(2-{4-[(CYCLOPROPYLCARBAMOYL)AMINO]-1H-PYRAZOL-3-YL}-1H-BENZIMIDAZOL-6-YL)METHYL]MORPHOLIN-4-IUM
Formula:C19 H24 N7 O2
SMILES:O=C(NC1CC1)Nc2cnnc2c4nc3ccc(cc3n4)C[NH+]5CCOCC5
InChi:InChI=1S/C19H23N7O2/c27-19(21-13-2-3-13)24-16-10-20-25-17(16)18-22-14-4-1-12(9-15(14)23-18)11-26-5-7-28-8-6-26/h1,4,9-10,13H,2-3,5-8,11H2,(H,20,25)(H,22,23)(H2,21,24,27)/p+1
Definition date:2008-10-17
Last modified:2011-06-04
Identifier:4-[(2-{4-[(cyclopropylcarbamoyl)amino]-1H-pyrazol-3-yl}-1H-benzimidazol-6-yl)methyl]morpholin-4-ium
JU2
JU2
Name:2-amino-6-bromo-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile
Formula:C7 H4 Br N5 O
SMILES:N#Cc1c(Br)nc2N=C(NC(=O)c12)N
InChi:InChI=1S/C7H4BrN5O/c8-4-2(1-9)3-5(11-4)12-7(10)13-6(3)14/h(H4,10,11,12,13,14)
Definition date:2007-12-20
Last modified:2011-06-04
Identifier:2-amino-6-bromo-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile
JZK
JZK
Name:2-[(2-chlorobenzyl)amino]-1-(cyclohexylmethyl)-1H-benzimidazole-5-carboxamide
Formula:C22 H25 Cl N4 O
SMILES:Clc1ccccc1CNc3nc2cc(ccc2n3CC4CCCCC4)C(=O)N
InChi:InChI=1S/C22H25ClN4O/c23-18-9-5-4-8-17(18)13-25-22-26-19-12-16(21(24)28)10-11-20(19)27(22)14-15-6-2-1-3-7-15/h4-5,8-12,15H,1-3,6-7,13-14H2,(H2,24,28)(H,25,26)
Definition date:2009-09-29
Last modified:2011-06-04
Identifier:2-[(2-chlorobenzyl)amino]-1-(cyclohexylmethyl)-1H-benzimidazole-5-carboxamide
JZL
JZL
Name:7-amino-2-[(2-chlorobenzyl)amino]-1-{[(1S,2S)-2-hydroxycycloheptyl]methyl}-1H-benzimidazole-5-carboxamide
Formula:C23 H28 Cl N5 O2
SMILES:Clc1ccccc1CNc3nc2cc(cc(c2n3CC4CCCCCC4O)N)C(=O)N
InChi:InChI=1S/C23H28ClN5O2/c24-17-8-5-4-6-14(17)12-27-23-28-19-11-16(22(26)31)10-18(25)21(19)29(23)13-15-7-2-1-3-9-20(15)30/h4-6,8,10-11,15,20,30H,1-3,7,9,12-13,25H2,(H2,26,31)(H,27,28)/t15-,20-/m0/s1
Definition date:2009-09-29
Last modified:2011-06-04
Identifier:7-amino-2-[(2-chlorobenzyl)amino]-1-{[(1S,2S)-2-hydroxycycloheptyl]methyl}-1H-benzimidazole-5-carboxamide
K11
K11
Name:N-[4-({3-[2-(methylamino)pyrimidin-4-yl]pyridin-2-yl}oxy)naphthalen-1-yl]-6-(trifluoromethyl)-1H-benzimidazol-2-amine
Formula:C28 H20 F3 N7 O
SMILES:FC(F)(F)c6cc1c(nc(n1)Nc5c2ccccc2c(Oc4ncccc4c3nc(ncc3)NC)cc5)cc6
InChi:InChI=1S/C28H20F3N7O/c1-32-26-34-14-12-21(35-26)19-7-4-13-33-25(19)39-24-11-10-20(17-5-2-3-6-18(17)24)36-27-37-22-9-8-16(28(29,30)31)15-23(22)38-27/h2-15H,1H3,(H,32,34,35)(H2,36,37,38)
Definition date:2008-10-17
Last modified:2011-06-04
Identifier:N-[4-({3-[2-(methylamino)pyrimidin-4-yl]pyridin-2-yl}oxy)naphthalen-1-yl]-6-(trifluoromethyl)-1H-benzimidazol-2-amine
K17
K17
Name:4,5,6,7-TETRABROMO-BENZIMIDAZOLE
Formula:C7 H2 Br4 N2
SMILES:Brc2c1c(ncn1)c(Br)c(Br)c2Br
InChi:InChI=1S/C7H2Br4N2/c8-2-3(9)5(11)7-6(4(2)10)12-1-13-7/h1H,(H,12,13)
Definition date:2007-03-12
Last modified:2011-06-04
Identifier:4,5,6,7-tetrabromo-1H-benzimidazole
K22
K22
Name:4,5,6,7-TETRABROMO-1H,3H-BENZIMIDAZOL-2-THIONE
Formula:C7 H2 Br4 N2 S
SMILES:Brc1c2c(c(Br)c(Br)c1Br)NC(=S)N2
InChi:InChI=1S/C7H2Br4N2S/c8-1-2(9)4(11)6-5(3(1)10)12-7(14)13-6/h(H2,12,13,14)
Definition date:2007-03-12
Last modified:2011-06-04
Identifier:4,5,6,7-tetrabromo-1,3-dihydro-2H-benzimidazole-2-thione
LC1
LC1
Name:2-(1,3-thiazol-4-yl)-1H-benzimidazole-5-sulfonamide
Formula:C10 H8 N4 O2 S2
SMILES:O=S(=O)(N)c3ccc2c(nc(c1ncsc1)n2)c3
InChi:InChI=1S/C10H8N4O2S2/c11-18(15,16)6-1-2-7-8(3-6)14-10(13-7)9-4-17-5-12-9/h1-5H,(H,13,14)(H2,11,15,16)
Definition date:2008-12-08
Last modified:2011-06-04
Identifier:2-(1,3-thiazol-4-yl)-1H-benzimidazole-5-sulfonamide
K32
K32
Name:4,5,6,7-TETRABROMO-1H,3H-BENZIMIDAZOL-2-ONE
Formula:C7 H2 Br4 N2 O
SMILES:Brc1c2c(c(Br)c(Br)c1Br)NC(=O)N2
InChi:InChI=1S/C7H2Br4N2O/c8-1-2(9)4(11)6-5(3(1)10)12-7(14)13-6/h(H2,12,13,14)
Definition date:2007-02-21
Last modified:2011-06-04
Identifier:4,5,6,7-tetrabromo-1,3-dihydro-2H-benzimidazol-2-one
K66
K66
Name:[4,5,6,7-tetrabromo-2-(dimethylamino)-1H-benzimidazol-1-yl]acetic acid
Formula:C11 H9 Br4 N3 O2
SMILES:CN(C)c1nc2c(Br)c(Br)c(Br)c(Br)c2n1CC(O)=O
InChi:InChI=1S/C11H9Br4N3O2/c1-17(2)11-16-9-7(14)5(12)6(13)8(15)10(9)18(11)3-4(19)20/h3H2,1-2H3,(H,19,20)
Definition date:2009-12-04
Last modified:2011-06-04
Identifier:2-[4,5,6,7-tetrabromo-2-(dimethylamino)benzimidazol-1-yl]ethanoic acid
K68
K68
Name:(4,5,6,7-tetrabromo-1H-benzimidazol-1-yl)acetic acid
Formula:C9 H4 Br4 N2 O2
SMILES:OC(=O)Cn1cnc2c(Br)c(Br)c(Br)c(Br)c12
InChi:InChI=1S/C9H4Br4N2O2/c10-4-5(11)7(13)9-8(6(4)12)14-2-15(9)1-3(16)17/h2H,1H2,(H,16,17)
Definition date:2009-12-04
Last modified:2011-06-04
Identifier:2-(4,5,6,7-tetrabromobenzimidazol-1-yl)ethanoic acid
K74
K74
Name:N-methyl-2-[(4,5,6,7-tetrabromo-1-methyl-1H-benzimidazol-2-yl)sulfanyl]acetamide
Formula:C11 H9 Br4 N3 O S
SMILES:CNC(=O)CSc1nc2c(Br)c(Br)c(Br)c(Br)c2n1C
InChi:InChI=1S/C11H9Br4N3OS/c1-16-4(19)3-20-11-17-9-7(14)5(12)6(13)8(15)10(9)18(11)2/h3H2,1-2H3,(H,16,19)
Definition date:2009-12-04
Last modified:2011-06-04
Identifier:N-methyl-2-(4,5,6,7-tetrabromo-1-methyl-benzimidazol-2-yl)sulfanyl-ethanamide
K8X
K8X
Name:4,5,6,7-tetraiodo-1H-benzimidazole
Formula:C7 H2 I4 N2
SMILES:Ic1c(I)c(I)c2nc[nH]c2c1I
InChi:InChI=1S/C7H2I4N2/c8-2-3(9)5(11)7-6(4(2)10)12-1-13-7/h1H,(H,12,13)
Definition date:2009-12-04
Last modified:2011-06-04
Identifier:4,5,6,7-tetraiodo-1H-benzimidazole
M1B
M1B
Name:2-{3'-[AMINO(IMINO)METHYL]BIPHENYL-4-YL}-1H-BENZIMIDAZOLE-5-CARBOXIMIDAMIDE
Formula:C21 H18 N6
SMILES:[N@H]=C(N)c1cc(ccc1)c4ccc(c3nc2cc(ccc2n3)C(=[N@H])N)cc4
InChi:InChI=1S/C21H18N6/c22-19(23)15-3-1-2-14(10-15)12-4-6-13(7-5-12)21-26-17-9-8-16(20(24)25)11-18(17)27-21/h1-11H,(H3,22,23)(H3,24,25)(H,26,27)
Definition date:2006-08-25
Last modified:2011-06-04
Identifier:2-(3'-carbamimidoylbiphenyl-4-yl)-1H-benzimidazole-5-carboximidamide
314
314
Name:N'-[(1S,2R)-2-[(2R,4S)-4-benzylpiperidin-2-yl]-1-(3,5-difluorobenzyl)-2-hydroxyethyl]-5-methyl-N,N-dipropylbenzene-1,3-dicarboxamide
Formula:C36 H45 F2 N3 O3
SMILES:O=C(N(CCC)CCC)c1cc(cc(c1)C)C(=O)NC(Cc2cc(F)cc(F)c2)C(O)C4NCCC(Cc3ccccc3)C4
InChi:InChI=1S/C36H45F2N3O3/c1-4-13-41(14-5-2)36(44)29-16-24(3)15-28(22-29)35(43)40-33(21-27-18-30(37)23-31(38)19-27)34(42)32-20-26(11-12-39-32)17-25-9-7-6-8-10-25/h6-10,15-16,18-19,22-23,26,32-34,39,42H,4-5,11-14,17,20-21H2,1-3H3,(H,40,43)/t26-,32-,33+,34-/m1/s1
Definition date:2008-04-08
Last modified:2011-06-04
Identifier:N'-[(1S,2R)-2-[(2R,4S)-4-benzylpiperidin-2-yl]-1-(3,5-difluorobenzyl)-2-hydroxyethyl]-5-methyl-N,N-dipropylbenzene-1,3-dicarboxamide
MBB
MBB
Name:2'-(3-METHYL-4-DIMETHYLAMINOPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE
Formula:C28 H31 N7
SMILES:n2c(c1ccc(N(C)C)cc1C)nc3ccc(cc23)c5nc4cc(ccc4n5)N6CCN(C)CC6
InChi:InChI=1S/C28H31N7/c1-18-15-20(33(2)3)6-8-22(18)28-30-23-9-5-19(16-25(23)32-28)27-29-24-10-7-21(17-26(24)31-27)35-13-11-34(4)12-14-35/h5-10,15-17H,11-14H2,1-4H3,(H,29,31)(H,30,32)
Definition date:1999-07-08
Last modified:2011-06-04
Identifier:N,N,3-trimethyl-4-[5-(4-methylpiperazin-1-yl)-1H,1'H-2,5'-bibenzimidazol-2'-yl]aniline
MBZ
MBZ
Name:1-[2-DEOXYRIBOFURANOSYL]-4-METHYL-BENZOIMIDAZOLE-5'-MONOPHOSPHATE
Formula:C13 H17 N2 O6 P
SMILES:O=P(O)(O)OCC3OC(n2cnc1c(cccc12)C)CC3O
InChi:InChI=1S/C13H17N2O6P/c1-8-3-2-4-9-13(8)14-7-15(9)12-5-10(16)11(21-12)6-20-22(17,18)19/h2-4,7,10-12,16H,5-6H2,1H3,(H2,17,18,19)/t10-,11+,12+/m0/s1
Definition date:2000-02-03
Last modified:2011-06-04
Identifier:1-(2-deoxy-5-O-phosphono-beta-D-erythro-pentofuranosyl)-4-methyl-1H-benzimidazole
MP7
MP7
Name:1-(3,4-difluorobenzyl)-2-oxo-N-{(1R)-2-[(2-oxo-2,3-dihydro-1H-benzimidazol-5-yl)oxy]-1-phenylethyl}-1,2-dihydropyridine-3-carboxamide
Formula:C28 H22 F2 N4 O4
SMILES:O=C5Nc4ccc(OCC(c1ccccc1)NC(=O)C2=CC=CN(C2=O)Cc3cc(F)c(F)cc3)cc4N5
InChi:InChI=1S/C28H22F2N4O4/c29-21-10-8-17(13-22(21)30)15-34-12-4-7-20(27(34)36)26(35)31-25(18-5-2-1-3-6-18)16-38-19-9-11-23-24(14-19)33-28(37)32-23/h1-14,25H,15-16H2,(H,31,35)(H2,32,33,37)/t25-/m0/s1
Definition date:2010-06-08
Last modified:2011-06-04
Identifier:1-(3,4-difluorobenzyl)-2-oxo-N-{(1R)-2-[(2-oxo-2,3-dihydro-1H-benzimidazol-5-yl)oxy]-1-phenylethyl}-1,2-dihydropyridine-3-carboxamide
MQ1
MQ1
Name:5-(4-METHOXYPHENOXY)-2,4-QUINAZOLINEDIAMINE
Formula:C15 H14 N4 O2
SMILES:n3c2c(c(Oc1ccc(OC)cc1)ccc2)c(nc3N)N
InChi:InChI=1S/C15H14N4O2/c1-20-9-5-7-10(8-6-9)21-12-4-2-3-11-13(12)14(16)19-15(17)18-11/h2-8H,1H3,(H4,16,17,18,19)
Definition date:2002-08-19
Last modified:2011-06-04
Identifier:5-(4-methoxyphenoxy)quinazoline-2,4-diamine
N2A
N2A
Name:N-[2-chloro-5-(1-{3-[4-(6-chloro-3-methyl-2-oxo-2,3-dihydro-1H-benzimidazol-1-yl)piperidin-1-yl]propyl}-6-oxo-1,6-dihydropyrimidin-5-yl)benzyl]-4-fluorobenzamide
Formula:C34 H33 Cl2 F N6 O3
SMILES:Fc1ccc(cc1)C(=O)NCc2c(Cl)ccc(c2)C3=CN=CN(C3=O)CCCN6CCC(N5c4cc(Cl)ccc4N(C5=O)C)CC6
InChi:InChI=1S/C34H33Cl2FN6O3/c1-40-30-10-6-25(35)18-31(30)43(34(40)46)27-11-15-41(16-12-27)13-2-14-42-21-38-20-28(33(42)45)23-5-9-29(36)24(17-23)19-39-32(44)22-3-7-26(37)8-4-22/h3-10,17-18,20-21,27H,2,11-16,19H2,1H3,(H,39,44)
Definition date:2010-04-29
Last modified:2011-06-04
Identifier:N-[2-chloro-5-(1-{3-[4-(6-chloro-3-methyl-2-oxo-2,3-dihydro-1H-benzimidazol-1-yl)piperidin-1-yl]propyl}-6-oxo-1,6-dihydropyrimidin-5-yl)benzyl]-4-fluorobenzamide
N2D
N2D
Name:N-[2-chloro-5-(1-{3-[4-(6-chloro-3-methyl-2-oxo-2,3-dihydro-1H-benzimidazol-1-yl)piperidin-1-yl]propyl}-6-oxo-1,6-dihydropyridazin-3-yl)benzyl]benzamide
Formula:C34 H34 Cl2 N6 O3
SMILES:Clc1ccc2c(c1)N(C(=O)N2C)C6CCN(CCCN3N=C(C=CC3=O)c4ccc(Cl)c(c4)CNC(=O)c5ccccc5)CC6
InChi:InChI=1S/C34H34Cl2N6O3/c1-39-30-12-9-26(35)21-31(30)42(34(39)45)27-14-18-40(19-15-27)16-5-17-41-32(43)13-11-29(38-41)24-8-10-28(36)25(20-24)22-37-33(44)23-6-3-2-4-7-23/h2-4,6-13,20-21,27H,5,14-19,22H2,1H3,(H,37,44)
Definition date:2010-04-29
Last modified:2011-06-04
Identifier:N-[2-chloro-5-(1-{3-[4-(6-chloro-3-methyl-2-oxo-2,3-dihydro-1H-benzimidazol-1-yl)piperidin-1-yl]propyl}-6-oxo-1,6-dihydropyridazin-3-yl)benzyl]benzamide
42Z
42Z
Name:N-[(5,6-dichloro-1H-benzimidazol-2-yl)carbonyl]glycine
Formula:C10 H7 Cl2 N3 O3
SMILES:O=C(O)CNC(=O)c2nc1cc(Cl)c(Cl)cc1n2
InChi:InChI=1S/C10H7Cl2N3O3/c11-4-1-6-7(2-5(4)12)15-9(14-6)10(18)13-3-8(16)17/h1-2H,3H2,(H,13,18)(H,14,15)(H,16,17)
Definition date:2010-09-15
Last modified:2011-06-04
Identifier:N-[(5,6-dichloro-1H-benzimidazol-2-yl)carbonyl]glycine
430
430
Name:5-(1H-benzimidazol-1-yl)-3-{(1R)-1-[2-(trifluoromethyl)phenyl]ethoxy}thiophene-2-carboxamide
Formula:C21 H16 F3 N3 O2 S
SMILES:FC(F)(F)c1ccccc1C(Oc4c(sc(n3cnc2ccccc23)c4)C(=O)N)C
InChi:InChI=1S/C21H16F3N3O2S/c1-12(13-6-2-3-7-14(13)21(22,23)24)29-17-10-18(30-19(17)20(25)28)27-11-26-15-8-4-5-9-16(15)27/h2-12H,1H3,(H2,25,28)/t12-/m1/s1
Definition date:2010-08-05
Last modified:2011-06-04
Identifier:5-(1H-benzimidazol-1-yl)-3-{(1R)-1-[2-(trifluoromethyl)phenyl]ethoxy}thiophene-2-carboxamide
NE8
NE8
Name:6-AMINO-4-(2-PHENYLETHYL)-1,7-DIHYDRO-8H-IMIDAZO[4,5-G]QUINAZOLIN-8-ONE
Formula:C17 H15 N5 O
SMILES:O=C1NC(=Nc3c1cc2c(ncn2)c3CCc4ccccc4)N
InChi:InChI=1S/C17H15N5O/c18-17-21-14-11(7-6-10-4-2-1-3-5-10)15-13(19-9-20-15)8-12(14)16(23)22-17/h1-5,8-9H,6-7H2,(H,19,20)(H3,18,21,22,23)
Definition date:2004-12-07
Last modified:2011-06-04
Identifier:6-amino-4-(2-phenylethyl)-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon