Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
9CD
9CD
Name:2-{[(2E)-but-2-enoyl]amino}-2-deoxy-beta-D-glucopyranose
Formula:C10 H17 N O6
SMILES:OC1C(C(OC(C1O)CO)O)NC([C@H]=CC)=O
InChi:InChI=1S/C10H17NO6/c1-2-3-6(13)11-7-9(15)8(14)5(4-12)17-10(7)16/h2-3,5,7-10,12,14-16H,4H2,1H3,(H,11,13)/b3-2+/t5-,7-,8-,9-,10-/m1/s1
Synonyms:2-{[(2E)-but-2-enoyl]amino}-2-deoxy-beta-D-glucose
Definition date:2017-04-18
Last modified:2020-07-17
Release date:2017-10-18
Identifier:2-{[(2E)-but-2-enoyl]amino}-2-deoxy-beta-D-glucopyranose
9GP
9GP
Name:N-(hydroxyacetyl)-beta-D-glucopyranosylamine
Formula:C8 H15 N O7
SMILES:O=C(NC1OC(C(O)C(O)C1O)CO)CO
InChi:InChI=1S/C8H15NO7/c10-1-3-5(13)6(14)7(15)8(16-3)9-4(12)2-11/h3,5-8,10-11,13-15H,1-2H2,(H,9,12)/t3-,5-,6+,7-,8-/m1/s1
Synonyms:N-(hydroxyacetyl)-beta-D-glucosylamine
Definition date:2009-02-05
Last modified:2020-07-17
Identifier:N-(hydroxyacetyl)-beta-D-glucopyranosylamine
9KJ
9KJ
Name:{[(2R,3R,4R,5R)-3-(alpha-D-glucopyranosyloxy)-4-hydroxy-2,5-bis(hydroxymethyl)pyrrolidin-1-yl]methyl}phosphonic acid
Formula:C13 H26 N O12 P
SMILES:C(C2C(OC1C(O)C(C(C(CO)O1)O)O)C(C(N2CP(=O)(O)O)CO)O)O
InChi:InChI=1S/C13H26NO12P/c15-1-5-8(18)12(6(2-16)14(5)4-27(22,23)24)26-13-11(21)10(20)9(19)7(3-17)25-13/h5-13,15-21H,1-4H2,(H2,22,23,24)/t5-,6-,7-,8-,9-,10+,11-,12-,13-/m1/s1
Synonyms:{[(2R,3R,4R,5R)-3-(alpha-D-glucosyloxy)-4-hydroxy-2,5-bis(hydroxymethyl)pyrrolidin-1-yl]methyl}phosphonic acid
Definition date:2017-05-17
Last modified:2020-07-17
Release date:2017-06-07
Identifier:{[(2R,3R,4R,5R)-3-(alpha-D-glucopyranosyloxy)-4-hydroxy-2,5-bis(hydroxymethyl)pyrrolidin-1-yl]methyl}phosphonic acid
9MR
9MR
Name:(3R,4R,5R)-3-hydroxy-5-(hydroxymethyl)piperidin-4-yl beta-D-glucopyranoside
Formula:C12 H23 N O8
SMILES:O(C1C(O)CNCC1CO)C2OC(C(O)C(O)C2O)CO
InChi:InChI=1S/C12H23NO8/c14-3-5-1-13-2-6(16)11(5)21-12-10(19)9(18)8(17)7(4-15)20-12/h5-19H,1-4H2/t5-,6-,7-,8-,9+,10-,11-,12+/m1/s1
Synonyms:CELLOBIOSE-LIKE ISOFAGOMINE
Definition date:2007-02-26
Last modified:2020-07-17
Identifier:(3R,4R,5R)-3-hydroxy-5-(hydroxymethyl)piperidin-4-yl beta-D-glucopyranoside
D1M
D1M
Name:5-ethynyl-1-(beta-D-glucopyranosyl)pyrimidine-2,4(1H,3H)-dione
Formula:C12 H14 N2 O7
SMILES:O=C1NC(=O)N(C=C1C#C)C2OC(C(O)C(O)C2O)CO
InChi:InChI=1S/C12H14N2O7/c1-2-5-3-14(12(20)13-10(5)19)11-9(18)8(17)7(16)6(4-15)21-11/h1,3,6-9,11,15-18H,4H2,(H,13,19,20)/t6-,7-,8+,9-,11-/m1/s1
Synonyms:5-ethynyl-1-(beta-D-glucosyl)pyrimidine-2,4(1H,3H)-dione
Definition date:2012-04-12
Last modified:2020-07-17
Identifier:5-ethynyl-1-(beta-D-glucopyranosyl)pyrimidine-2,4(1H,3H)-dione
D5E
D5E
Name:paromamine
Formula:C12 H25 N3 O7
SMILES:N[CH]1C[CH](N)[CH](O[CH]2O[CH](CO)[CH](O)[CH](O)[CH]2N)[CH](O)[CH]1O
InChi:InChI=1S/C12H25N3O7/c13-3-1-4(14)11(10(20)7(3)17)22-12-6(15)9(19)8(18)5(2-16)21-12/h3-12,16-20H,1-2,13-15H2/t3-,4+,5-,6-,7+,8-,9-,10-,11-,12-/m1/s1
Definition date:2017-12-21
Last modified:2020-07-17
Release date:2018-01-17
Identifier:(2~{R},3~{S},4~{R},5~{R},6~{S})-5-azanyl-6-[(1~{R},2~{R},3~{S},4~{R},6~{S})-4,6-bis(azanyl)-2,3-bis(oxidanyl)cyclohexyl ]oxy-2-(hydroxymethyl)oxane-3,4-diol
D6G
D6G
Name:2-deoxy-6-O-phosphono-alpha-D-glucopyranose
Formula:C6 H13 O8 P
SMILES:O=P(O)(O)OCC1OC(O)CC(O)C1O
InChi:InChI=1S/C6H13O8P/c7-3-1-5(8)14-4(6(3)9)2-13-15(10,11)12/h3-9H,1-2H2,(H2,10,11,12)/t3-,4-,5+,6+/m1/s1
Synonyms:2-deoxy-6-O-phosphono-alpha-D-arabino-hexopyranose
Definition date:1999-07-08
Last modified:2020-07-17
Identifier:2-deoxy-6-O-phosphono-alpha-D-arabino-hexopyranose
KME
KME
Name:(1E)-prop-1-en-1-yl 3-deoxy-7-O-methyl-alpha-D-manno-oct-2-ulopyranosidonic acid
Formula:C12 H20 O8
SMILES:O=C(O)C1(O/C=C/C)OC(C(O)C(O)C1)C(OC)CO
InChi:InChI=1S/C12H20O8/c1-3-4-19-12(11(16)17)5-7(14)9(15)10(20-12)8(6-13)18-2/h3-4,7-10,13-15H,5-6H2,1-2H3,(H,16,17)/b4-3+/t7-,8-,9-,10-,12-/m1/s1
Synonyms:(1E)-prop-1-en-1-yl 3-deoxy-7-O-methyl-alpha-D-manno-oct-2-ulosidonic acid
Definition date:2009-08-06
Last modified:2020-07-17
Identifier:(1E)-prop-1-en-1-yl 3-deoxy-7-O-methyl-alpha-D-manno-oct-2-ulopyranosidonic acid
KO1
KO1
Name:D-glycero-alpha-D-talo-oct-2-ulopyranosonic acid
Formula:C8 H14 O9
SMILES:O=C(O)C1(O)OC(C(O)CO)C(O)C(O)C1O
InChi:InChI=1S/C8H14O9/c9-1-2(10)5-3(11)4(12)6(13)8(16,17-5)7(14)15/h2-6,9-13,16H,1H2,(H,14,15)/t2-,3-,4+,5-,6+,8-/m1/s1
Synonyms:D-glycero-alpha-D-talo-oct-2-ulosonic acid
Definition date:2008-01-15
Last modified:2020-07-17
Identifier:D-glycero-alpha-D-talo-oct-2-ulopyranosonic acid
KO2
KO2
Name:prop-2-en-1-yl D-glycero-alpha-D-talo-oct-2-ulopyranosidonic acid
Formula:C11 H18 O9
SMILES:O=C(O)C1(OCC=C)OC(C(O)CO)C(O)C(O)C1O
InChi:InChI=1S/C11H18O9/c1-2-3-19-11(10(17)18)9(16)7(15)6(14)8(20-11)5(13)4-12/h2,5-9,12-16H,1,3-4H2,(H,17,18)/t5-,6-,7+,8-,9+,11-/m1/s1
Synonyms:prop-2-en-1-yl D-glycero-alpha-D-talo-oct-2-ulosidonic acid
Definition date:2008-01-18
Last modified:2020-07-17
Identifier:prop-2-en-1-yl D-glycero-alpha-D-talo-oct-2-ulopyranosidonic acid
KOT
KOT
Name:1-beta-D-glucopyranosyl-4-phenyl-1H-1,2,3-triazole
Formula:C14 H17 N3 O5
SMILES:n1nn(cc1c2ccccc2)C3OC(C(O)C(O)C3O)CO
InChi:InChI=1S/C14H17N3O5/c18-7-10-11(19)12(20)13(21)14(22-10)17-6-9(15-16-17)8-4-2-1-3-5-8/h1-6,10-14,18-21H,7H2/t10-,11-,12+,13-,14-/m1/s1
Synonyms:1-beta-D-glucosyl-4-phenyl-1H-1,2,3-triazole
Definition date:2009-02-05
Last modified:2020-07-17
Identifier:1-beta-D-glucopyranosyl-4-phenyl-1H-1,2,3-triazole
KTU
KTU
Name:prop-2-en-1-yl 3,5-dideoxy-alpha-D-threo-oct-5-en-2-ulopyranosidonic acid
Formula:C11 H16 O7
SMILES:C=CCOC1(C(O)=O)OC(C(CO)O)=CC(C1)O
InChi:InChI=1S/C11H16O7/c1-2-3-17-11(10(15)16)5-7(13)4-9(18-11)8(14)6-12/h2,4,7-8,12-14H,1,3,5-6H2,(H,15,16)/t7-,8+,11+/m0/s1
Synonyms:prop-2-en-1-yl 3,5-dideoxy-alpha-D-threo-oct-5-en-2-ulosidonic acid
Definition date:2012-10-12
Last modified:2020-07-17
Release date:2013-01-04
Identifier:prop-2-en-1-yl 3,5-dideoxy-alpha-D-threo-oct-5-en-2-ulopyranosidonic acid
0HX
0HX
Name:pentan-3-yl 2-acetamido-2,4-dideoxy-alpha-L-threo-hex-4-enopyranosiduronic acid
Formula:C13 H21 N O6
SMILES:CCC(CC)O[CH]1OC(=C[CH](O)[CH]1NC(C)=O)C(O)=O
InChi:InChI=1S/C13H21NO6/c1-4-8(5-2)19-13-11(14-7(3)15)9(16)6-10(20-13)12(17)18/h6,8-9,11,13,16H,4-5H2,1-3H3,(H,14,15)(H,17,18)/t9-,11+,13+/m0/s1
Synonyms:pentan-3-yl 2-(acetylamino)-2,4-dideoxy-alpha-L-threo-hex-4-enopyranosiduronic acid
Definition date:2012-01-19
Last modified:2020-07-17
Release date:2013-02-08
Identifier:(2~{R},3~{R},4~{S})-3-acetamido-4-oxidanyl-2-pentan-3-yloxy-3,4-dihydro-2~{H}-pyran-6-carboxylic acid
0LP
0LP
Name:5-acetamido-2,6-anhydro-3,5-dideoxy-3-[(2E)-3-phenylprop-2-en-1-yl]-D-glycero-L-altro-non-2-enonic acid
Formula:C20 H25 N O8
SMILES:CC(=O)NC1C(O)C(=C(OC1C(O)C(O)CO)C(O)=O)C[C@H]=Cc2ccccc2
InChi:InChI=1S/C20H25NO8/c1-11(23)21-15-16(25)13(9-5-8-12-6-3-2-4-7-12)18(20(27)28)29-19(15)17(26)14(24)10-22/h2-8,14-17,19,22,24-26H,9-10H2,1H3,(H,21,23)(H,27,28)/b8-5+/t14-,15-,16+,17+,19-/m1/s1
Synonyms:5-(acetylamino)-2,6-anhydro-3,5-dideoxy-3-[(2E)-3-phenylprop-2-en-1-yl]-D-glycero-L-altro-non-2-enonic acid
Definition date:2012-08-16
Last modified:2020-07-17
Release date:2012-09-21
Identifier:5-(acetylamino)-2,6-anhydro-3,5-dideoxy-3-[(2E)-3-phenylprop-2-en-1-yl]-D-glycero-L-altro-non-2-enonic acid
0MK
0MK
Name:beta-L-ribopyranose
Formula:C5 H10 O5
SMILES:C1(O)C(O)C(O)C(CO1)O
InChi:InChI=1S/C5H10O5/c6-2-1-10-5(9)4(8)3(2)7/h2-9H,1H2/t2-,3-,4-,5-/m0/s1
Synonyms:beta-L-ribose
Definition date:2012-03-01
Last modified:2020-07-17
Release date:2013-03-20
Identifier:beta-L-ribopyranose
JV4
JV4
Name:6-deoxy-6-fluoro-1-O-phosphono-alpha-D-glucopyranose
Formula:C6 H12 F O8 P
SMILES:C1(C(C(OC(C1O)CF)OP(O)(=O)O)O)O
InChi:InChI=1S/C6H12FO8P/c7-1-2-3(8)4(9)5(10)6(14-2)15-16(11,12)13/h2-6,8-10H,1H2,(H2,11,12,13)/t2-,3-,4+,5-,6-/m1/s1
Synonyms:6-deoxy-6-fluoro-1-O-phosphono-alpha-D-glucose
Definition date:2018-09-28
Last modified:2020-07-17
Release date:2019-07-31
Identifier:6-deoxy-6-fluoro-1-O-phosphono-alpha-D-glucopyranose
JVA
JVA
Name:2,6-anhydro-5,7-dideoxy-5-fluoro-7-phosphono-D-glycero-D-manno-heptitol
Formula:C7 H14 F O7 P
SMILES:C1(OC(C(C(C1F)O)O)CO)CP(O)(O)=O
InChi:InChI=1S/C7H14FO7P/c8-5-4(2-16(12,13)14)15-3(1-9)6(10)7(5)11/h3-7,9-11H,1-2H2,(H2,12,13,14)/t3-,4-,5-,6-,7-/m1/s1
Definition date:2018-10-01
Last modified:2020-07-17
Release date:2019-07-31
Identifier:2,6-anhydro-5,7-dideoxy-5-fluoro-7-phosphono-D-glycero-D-manno-heptitol
0NZ
0NZ
Name:2-deoxy-6-O-phosphono-beta-D-glucopyranose
Formula:C6 H13 O8 P
SMILES:O=P(O)(O)OCC1OC(O)CC(O)C1O
InChi:InChI=1S/C6H13O8P/c7-3-1-5(8)14-4(6(3)9)2-13-15(10,11)12/h3-9H,1-2H2,(H2,10,11,12)/t3-,4-,5-,6+/m1/s1
Synonyms:2-deoxy-6-O-phosphono-beta-D-arabino-hexopyranose
Definition date:2012-08-17
Last modified:2020-07-17
Release date:2013-06-12
Identifier:2-deoxy-6-O-phosphono-beta-D-arabino-hexopyranose
JVS
JVS
Name:1-deoxy-1-fluoro-2-O-phosphono-alpha-D-gluco-hept-2-ulopyranose
Formula:C7 H14 F O9 P
SMILES:C1(C(C(CF)(OC(C1O)CO)OP(O)(=O)O)O)O
InChi:InChI=1S/C7H14FO9P/c8-2-7(17-18(13,14)15)6(12)5(11)4(10)3(1-9)16-7/h3-6,9-12H,1-2H2,(H2,13,14,15)/t3-,4-,5+,6-,7-/m1/s1
Synonyms:1-deoxy-1-fluoro-2-O-phosphono-alpha-D-gluco-hept-2-ulose
Definition date:2018-10-04
Last modified:2020-07-17
Release date:2019-07-31
Identifier:1-deoxy-1-fluoro-2-O-phosphono-alpha-D-gluco-hept-2-ulopyranose
JZR
JZR
Name:hexyl beta-D-glucopyranoside
Formula:C12 H24 O6
SMILES:CCCCCCO[CH]1O[CH](CO)[CH](O)[CH](O)[CH]1O
InChi:InChI=1S/C12H24O6/c1-2-3-4-5-6-17-12-11(16)10(15)9(14)8(7-13)18-12/h8-16H,2-7H2,1H3/t8-,9-,10+,11-,12-/m1/s1
Synonyms:hexyl beta-D-glucoside
Definition date:2009-11-11
Last modified:2020-07-17
Identifier:(2R,3R,4S,5S,6R)-2-hexoxy-6-(hydroxymethyl)oxane-3,4,5-triol
K5B
K5B
Name:4,7-anhydro-3-deoxy-D-gluco-oct-2-ulosonic acid
Formula:C8 H12 O7
SMILES:OC[CH]1O[CH](CC(=O)C(O)=O)[CH](O)[CH]1O
InChi:InChI=1S/C8H12O7/c9-2-5-7(12)6(11)4(15-5)1-3(10)8(13)14/h4-7,9,11-12H,1-2H2,(H,13,14)/t4-,5+,6+,7+/m0/s1
Synonyms:4,7-anhydro-3-deoxy-D-manno-oct-2-ulosonic acid
Definition date:2017-09-07
Last modified:2020-07-17
Release date:2018-06-20
Identifier:3-[(2~{S},3~{S},4~{S},5~{R})-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]-2-oxidanylidene-propanoic acid
E3M
E3M
Name:(1R)-4-acetamido-3-amino-1,5-anhydro-2,3,4-trideoxy-1-sulfo-D-glycero-D-galacto-octitol
Formula:C10 H20 N2 O8 S
SMILES:C1(OC(C(C(C1)N)NC(C)=O)C(C(CO)O)O)S(O)(=O)=O
InChi:InChI=1S/C10H20N2O8S/c1-4(14)12-8-5(11)2-7(21(17,18)19)20-10(8)9(16)6(15)3-13/h5-10,13,15-16H,2-3,11H2,1H3,(H,12,14)(H,17,18,19)/t5-,6+,7+,8+,9+,10+/m0/s1
Synonyms:(1R)-4-(acetylamino)-3-amino-1,5-anhydro-2,3,4-trideoxy-1-sulfo-D-glycero-D-galacto-octitol
Definition date:2017-11-30
Last modified:2020-07-17
Release date:2018-03-07
Identifier:(1R)-4-(acetylamino)-3-amino-1,5-anhydro-2,3,4-trideoxy-1-sulfo-D-glycero-D-galacto-octitol
E5G
E5G
Name:5-hydroxypentyl alpha-D-glucopyranoside
Formula:C11 H22 O7
SMILES:O(CCCCCO)C1OC(C(O)C(O)C1O)CO
InChi:InChI=1S/C11H22O7/c12-4-2-1-3-5-17-11-10(16)9(15)8(14)7(6-13)18-11/h7-16H,1-6H2/t7-,8-,9+,10-,11+/m1/s1
Synonyms:5-hydroxypentyl alpha-D-glucoside
Definition date:2012-01-11
Last modified:2020-07-17
Identifier:5-hydroxypentyl alpha-D-glucopyranoside
EAG
EAG
Name:2-aminoethyl 2-acetamido-2-deoxy-beta-D-glucopyranoside
Formula:C10 H20 N2 O6
SMILES:O=C(NC1C(O)C(O)C(OC1OCCN)CO)C
InChi:InChI=1S/C10H20N2O6/c1-5(14)12-7-9(16)8(15)6(4-13)18-10(7)17-3-2-11/h6-10,13,15-16H,2-4,11H2,1H3,(H,12,14)/t6-,7-,8-,9-,10-/m1/s1
Synonyms:2-aminoethyl 2-(acetylamino)-2-deoxy-beta-D-glucopyranoside
Definition date:2008-01-23
Last modified:2020-07-17
Identifier:2-aminoethyl 2-(acetylamino)-2-deoxy-beta-D-glucopyranoside
EBG
EBG
Name:2-[(2S)-oxiran-2-yl]ethyl alpha-D-glucopyranoside
Formula:C10 H18 O7
SMILES:O(CCC1OC1)C2OC(C(O)C(O)C2O)CO
InChi:InChI=1S/C10H18O7/c11-3-6-7(12)8(13)9(14)10(17-6)15-2-1-5-4-16-5/h5-14H,1-4H2/t5-,6+,7+,8-,9+,10-/m0/s1
Synonyms:2-HYDROXYMETHYL-6-(2-OXIRANYL-ETHOXY)-TETRAHYDRO-PYRAN-3,4,5-TRIOL
Definition date:2002-11-28
Last modified:2020-07-17
Identifier:2-[(2S)-oxiran-2-yl]ethyl alpha-D-glucopyranoside

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon