Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
MDP
MDP
Name:N-carboxyl-N-methyl-beta-muramic acid
Formula:C11 H19 N O9
SMILES:O=C(O)C(OC1C(O)C(OC(O)C1N(C(=O)O)C)CO)C
InChi:InChI=1S/C11H19NO9/c1-4(9(15)16)20-8-6(12(2)11(18)19)10(17)21-5(3-13)7(8)14/h4-8,10,13-14,17H,3H2,1-2H3,(H,15,16)(H,18,19)/t4-,5-,6-,7-,8-,10-/m1/s1
Synonyms:N-CARBOXY-N-METHYL-MURAMIC ACID
Definition date:1999-07-08
Last modified:2020-07-17
Identifier:3-O-[(1R)-1-carboxyethyl]-2-[carboxy(methyl)amino]-2-deoxy-alpha-D-glucopyranose
MFB
MFB
Name:methyl beta-L-fucopyranoside
Formula:C7 H14 O5
SMILES:OC1C(O)C(O)C(OC1OC)C
InChi:InChI=1S/C7H14O5/c1-3-4(8)5(9)6(10)7(11-2)12-3/h3-10H,1-2H3/t3-,4+,5+,6-,7-/m0/s1
Synonyms:BETA-L-METHYL-FUCOSE
Definition date:1999-07-08
Last modified:2020-07-17
Identifier:methyl 6-deoxy-beta-L-galactopyranoside
MFU
MFU
Name:methyl alpha-L-fucopyranoside
Formula:C7 H14 O5
SMILES:OC1C(O)C(O)C(OC1OC)C
InChi:InChI=1S/C7H14O5/c1-3-4(8)5(9)6(10)7(11-2)12-3/h3-10H,1-2H3/t3-,4+,5+,6-,7+/m0/s1
Synonyms:ALPHA-L-METHYL-FUCOSE
Definition date:1999-07-08
Last modified:2020-07-17
Identifier:methyl 6-deoxy-alpha-L-galactopyranoside
MG5
MG5
Name:2,3,4-tri-O-propanoyl-6-O-sulfamoyl-beta-D-glucopyranose
Formula:C15 H25 N O11 S
SMILES:O=S(=O)(OCC1OC(O)C(OC(=O)CC)C(OC(=O)CC)C1OC(=O)CC)N
InChi:InChI=1S/C15H25NO11S/c1-4-9(17)25-12-8(7-23-28(16,21)22)24-15(20)14(27-11(19)6-3)13(12)26-10(18)5-2/h8,12-15,20H,4-7H2,1-3H3,(H2,16,21,22)/t8-,12-,13+,14-,15-/m1/s1
Synonyms:2,3,4-tri-O-propanoyl-6-O-sulfamoyl-beta-D-glucose
Definition date:2011-08-30
Last modified:2020-07-17
Identifier:2,3,4-tri-O-propanoyl-6-O-sulfamoyl-beta-D-glucopyranose
1S3
1S3
Name:(2R,3aR,5R,6S,7S,7aR)-5-(hydroxymethyl)tetrahydro-3aH-[1,3,2]dioxaphospholo[4,5-b]pyran-2,6,7-triol 2-oxide
Formula:C6 H11 O8 P
SMILES:O=P1(OC2C(O)C(O)C(OC2O1)CO)O
InChi:InChI=1S/C6H11O8P/c7-1-2-3(8)4(9)5-6(12-2)14-15(10,11)13-5/h2-9H,1H2,(H,10,11)/t2-,3-,4+,5-,6-/m1/s1
Synonyms:Glucose1,2cyclic phosphate
Definition date:2013-05-15
Last modified:2020-07-17
Release date:2013-12-11
Identifier:(2R,3aR,5R,6S,7S,7aR)-5-(hydroxymethyl)tetrahydro-3aH-[1,3,2]dioxaphospholo[4,5-b]pyran-2,6,7-triol 2-oxide
1S4
1S4
Name:alpha-muramic acid
Formula:C9 H17 N O7
SMILES:O=C(O)C(OC1C(O)C(OC(O)C1N)CO)C
InChi:InChI=1S/C9H17NO7/c1-3(8(13)14)16-7-5(10)9(15)17-4(2-11)6(7)12/h3-7,9,11-12,15H,2,10H2,1H3,(H,13,14)/t3-,4-,5-,6-,7-,9+/m1/s1
Synonyms:muramic acid
Definition date:2013-05-15
Last modified:2020-07-17
Release date:2020-07-29
Identifier:2-amino-3-O-[(1R)-1-carboxyethyl]-2-deoxy-alpha-D-glucopyranose
MGC
MGC
Name:methyl 2-acetamido-2-deoxy-alpha-D-galactopyranoside
Formula:C9 H17 N O6
SMILES:O=C(NC1C(O)C(O)C(OC1OC)CO)C
InChi:InChI=1S/C9H17NO6/c1-4(12)10-6-8(14)7(13)5(3-11)16-9(6)15-2/h5-9,11,13-14H,3H2,1-2H3,(H,10,12)/t5-,6-,7+,8-,9+/m1/s1
Synonyms:ALPHA-METHYL-N-ACETYL-D-GALACTOSAMINE
Definition date:2003-07-02
Last modified:2020-07-17
Identifier:methyl 2-(acetylamino)-2-deoxy-alpha-D-galactopyranoside
1SD
1SD
Name:(1S)-1,5-anhydro-1-sulfamoyl-D-galactitol
Formula:C6 H13 N O7 S
SMILES:O=S(=O)(N)C1OC(C(O)C(O)C1O)CO
InChi:InChI=1S/C6H13NO7S/c7-15(12,13)6-5(11)4(10)3(9)2(1-8)14-6/h2-6,8-11H,1H2,(H2,7,12,13)/t2-,3+,4+,5-,6+/m1/s1
Synonyms:(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxane-2-sulfonamide
Definition date:2009-06-02
Last modified:2020-07-17
Identifier:(1S)-1,5-anhydro-1-sulfamoyl-D-galactitol
MGL
MGL
Name:methyl beta-D-glucopyranoside
Formula:C7 H14 O6
SMILES:OC1C(O)C(O)C(OC1OC)CO
InChi:InChI=1S/C7H14O6/c1-12-7-6(11)5(10)4(9)3(2-8)13-7/h3-11H,2H2,1H3/t3-,4-,5+,6-,7-/m1/s1
Synonyms:O1-METHYL-GLUCOSE
Definition date:1999-07-08
Last modified:2020-07-17
Identifier:methyl beta-D-glucopyranoside
MGS
MGS
Name:methyl 4,6-dideoxy-4-{[(2R)-2,4-dihydroxybutanoyl]amino}-2-O-methyl-alpha-D-mannopyranoside
Formula:C12 H23 N O7
SMILES:O=C(NC1C(OC(OC)C(OC)C1O)C)C(O)CCO
InChi:InChI=1S/C12H23NO7/c1-6-8(13-11(17)7(15)4-5-14)9(16)10(18-2)12(19-3)20-6/h6-10,12,14-16H,4-5H2,1-3H3,(H,13,17)/t6-,7-,8-,9+,10+,12+/m1/s1
Synonyms:1,2-O-DIMETHYL-4-[2,4-DIHYDROXY-BUTYRAMIDO]-4,6-DIDEOXY-ALPHA-D-MANNOPYRANOSIDE
Definition date:2000-06-26
Last modified:2020-07-17
Identifier:methyl 4,6-dideoxy-4-{[(2R)-2,4-dihydroxybutanoyl]amino}-2-O-methyl-alpha-D-mannopyranoside
MJJ
MJJ
Name:methyl 9-O-acetyl-5-acetamido-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranosidonic acid
Formula:C14 H23 N O10
SMILES:OC1C(NC(C)=O)C(OC(C1)(C(O)=O)OC)C(C(O)COC(=O)C)O
InChi:InChI=1S/C14H23NO10/c1-6(16)15-10-8(18)4-14(23-3,13(21)22)25-12(10)11(20)9(19)5-24-7(2)17/h8-12,18-20H,4-5H2,1-3H3,(H,15,16)(H,21,22)/t8-,9+,10+,11+,12+,14+/m0/s1
Synonyms:methyl 9-O-acetyl-5-(acetylamino)-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranosidonic acid
Definition date:2019-04-08
Last modified:2020-07-17
Release date:2019-06-05
Identifier:methyl 9-O-acetyl-5-(acetylamino)-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranosidonic acid
1X4
1X4
Name:2,3-dideoxy-5-O-phosphono-alpha-D-ribofuranose
Formula:C5 H11 O6 P
SMILES:O=P(OCC1OC(O)CC1)(O)O
InChi:InChI=1S/C5H11O6P/c6-5-2-1-4(11-5)3-10-12(7,8)9/h4-6H,1-3H2,(H2,7,8,9)/t4-,5-/m0/s1
Synonyms:2,3-dideoxyribose-5-phosphate
Definition date:2013-07-22
Last modified:2020-07-17
Release date:2013-07-31
Identifier:[(2S,5S)-5-hydroxytetrahydrofuran-2-yl]methyl dihydrogen phosphate
CT3
CT3
Name:beta-D-glucopyranosyl-(1->4)-beta-D-glucopyranosyl-(1->4)-beta-D-glucopyranose
Formula:C18 H32 O16
SMILES:O(C1C(OC(O)C(O)C1O)CO)C3OC(C(OC2OC(CO)C(O)C(O)C2O)C(O)C3O)CO
InChi:InChI=1S/C18H32O16/c19-1-4-7(22)8(23)12(27)17(31-4)34-15-6(3-21)32-18(13(28)10(15)25)33-14-5(2-20)30-16(29)11(26)9(14)24/h4-29H,1-3H2/t4-,5-,6-,7-,8+,9-,10-,11-,12-,13-,14-,15-,16-,17+,18+/m1/s1
Synonyms:Beta-CELLOTRIOSE
Definition date:1999-07-08
Last modified:2020-07-17
Identifier:beta-D-glucopyranosyl-(1->4)-beta-D-glucopyranosyl-(1->4)-beta-D-glucopyranose
CTO
CTO
Name:TRIACETYLCHITOTRIOSE
Formula:C24 H41 N3 O16
SMILES:O=C(NC3C(O)C(O)C(OC3OC2C(OC(OC1C(OC(O)C(NC(=O)C)C1O)CO)C(NC(=O)C)C2O)CO)CO)C
InChi:InChI=1S/C24H41N3O16/c1-7(31)25-13-18(36)20(11(5-29)39-22(13)38)42-24-15(27-9(3)33)19(37)21(12(6-30)41-24)43-23-14(26-8(2)32)17(35)16(34)10(4-28)40-23/h10-24,28-30,34-38H,4-6H2,1-3H3,(H,25,31)(H,26,32)(H,27,33)/t10-,11-,12-,13-,14-,15-,16-,17-,18-,19-,20-,21-,22-,23+,24+/m1/s1
Synonyms:CHITOTRIOSE
Definition date:1999-07-08
Last modified:2020-07-17
Identifier:2-(acetylamino)-2-deoxy-beta-D-glucopyranosyl-(1->4)-2-(acetylamino)-2-deoxy-beta-D-glucopyranosyl-(1->4)-2-(acetylamino)-2-deoxy-beta-D-glucopyranose
CTR
CTR
Name:CELLOTRIOSE
Formula:C18 H32 O16
SMILES:O(C1C(OC(O)C(O)C1O)CO)C3OC(C(OC2OC(CO)C(O)C(O)C2O)C(O)C3O)CO
InChi:InChI=1S/C18H32O16/c19-1-4-7(22)8(23)12(27)17(31-4)34-15-6(3-21)32-18(13(28)10(15)25)33-14-5(2-20)30-16(29)11(26)9(14)24/h4-29H,1-3H2/t4-,5-,6-,7-,8+,9-,10-,11-,12-,13-,14-,15-,16+,17+,18+/m1/s1
Synonyms:Dextrin
Definition date:1999-07-08
Last modified:2020-07-17
Identifier:beta-D-glucopyranosyl-(1->4)-beta-D-glucopyranosyl-(1->4)-alpha-D-glucopyranose
CTT
CTT
Name:beta-D-glucopyranosyl-(1->4)-beta-D-glucopyranosyl-(1->4)-beta-D-glucopyranosyl-(1->4)-beta-D-glucopyranose
Formula:C24 H42 O21
SMILES:O(C2C(OC(OC1C(O)C(O)C(O)OC1CO)C(O)C2O)CO)C4OC(C(OC3OC(CO)C(O)C(O)C3O)C(O)C4O)CO
InChi:InChI=1S/C24H42O21/c25-1-5-9(29)10(30)15(35)22(40-5)44-19-7(3-27)42-24(17(37)12(19)32)45-20-8(4-28)41-23(16(36)13(20)33)43-18-6(2-26)39-21(38)14(34)11(18)31/h5-38H,1-4H2/t5-,6-,7-,8-,9-,10+,11-,12-,13-,14-,15-,16-,17-,18-,19-,20-,21-,22+,23+,24+/m1/s1
Synonyms:CELLOTETRAOSE
Definition date:1999-07-08
Last modified:2020-07-17
Identifier:beta-D-glucopyranosyl-(1->4)-beta-D-glucopyranosyl-(1->4)-beta-D-glucopyranosyl-(1->4)-beta-D-glucopyranose
20S
20S
Name:BETA-D-FRUCTOFURANOSYL 6-O-OCTANOYL-ALPHA-D-GLUCOPYRANOSIDE
Formula:C20 H36 O12
SMILES:O=C(OCC2OC(OC1(OC(C(O)C1O)CO)CO)C(O)C(O)C2O)CCCCCCC
InChi:InChI=1S/C20H36O12/c1-2-3-4-5-6-7-13(23)29-9-12-14(24)16(26)17(27)19(30-12)32-20(10-22)18(28)15(25)11(8-21)31-20/h11-12,14-19,21-22,24-28H,2-10H2,1H3/t11-,12-,14-,15-,16+,17-,18+,19-,20+/m1/s1
Definition date:2006-01-05
Last modified:2020-07-17
Identifier:beta-D-fructofuranosyl 6-O-octanoyl-alpha-D-glucopyranoside
20X
20X
Name:N-({(2E)-2-[(4-fluorophenyl)methylidene]hydrazino}carbonothioyl)-beta-D-glucopyranosylamine
Formula:C14 H18 F N3 O5 S
SMILES:S=C(NC1OC(C(O)C(O)C1O)CO)N/N=C/c2ccc(F)cc2
InChi:InChI=1S/C14H18FN3O5S/c15-8-3-1-7(2-4-8)5-16-18-14(24)17-13-12(22)11(21)10(20)9(6-19)23-13/h1-5,9-13,19-22H,6H2,(H2,17,18,24)/b16-5+/t9-,10-,11+,12-,13-/m1/s1
Synonyms:4-fluorobenzaldehyde-4-(beta-D-glucopyranosyl)-thiosemicarbazone
Definition date:2010-04-30
Last modified:2020-07-17
Identifier:N-{[(2E)-2-(4-fluorobenzylidene)hydrazinyl]carbothioyl}-beta-D-glucopyranosylamine
6UD
6UD
Name:5-acetamido-2,6-anhydro-3,5,9-trideoxy-9-triazan-1-yl-D-glycero-D-galacto-non-2-enonic acid
Formula:C11 H20 N4 O7
SMILES:C(C=1OC(C(C(C=1)O)NC(=O)C)C(C(O)CNNN)O)(=O)O
InChi:InChI=1S/C11H20N4O7/c1-4(16)14-8-5(17)2-7(11(20)21)22-10(8)9(19)6(18)3-13-15-12/h2,5-6,8-10,13,15,17-19H,3,12H2,1H3,(H,14,16)(H,20,21)/t5-,6+,8+,9+,10+/m0/s1
Synonyms:(2~{R},3~{R},4~{S})-3-acetamido-2-[(1~{R},2~{R})-3-(2-azanylhydrazinyl)-1,2-bis(oxidanyl)propyl]-4-oxidanyl-3,4-dihydro -2~{H}-pyran-6-carboxylic acid
Definition date:2016-06-27
Last modified:2020-07-17
Release date:2017-06-28
Identifier:5-(acetylamino)-2,6-anhydro-3,5,9-trideoxy-9-triazan-1-yl-D-glycero-D-galacto-non-2-enonic acid
6Y6
6Y6
Name:2,6-anhydro-3,4,5-trideoxy-4-[4-(methoxymethyl)-1H-1,2,3-triazol-1-yl]-5-[(2-methylpropanoyl)amino]-D-glycero-D-galacto -non-2-enonic acid
Formula:C17 H26 N4 O8
SMILES:OC(=O)C2=CC(n1cc(nn1)COC)C(NC(=O)C(C)C)C(O2)C(O)C(O)CO
InChi:InChI=1S/C17H26N4O8/c1-8(2)16(25)18-13-10(21-5-9(7-28-3)19-20-21)4-12(17(26)27)29-15(13)14(24)11(23)6-22/h4-5,8,10-11,13-15,22-24H,6-7H2,1-3H3,(H,18,25)(H,26,27)/t10-,11+,13+,14+,15+/m0/s1
Synonyms:(2~{R},3~{R},4~{S})-4-[4-(methoxymethyl)-1,2,3-triazol-1-yl]-3-(2-methylpropanoylamino)-2-[(1~{R},2~{R})-1,2,3-tris(oxi danyl)propyl]-3,4-dihydro-2~{H}-pyran-6-carboxylic acid
Definition date:2016-07-21
Last modified:2020-07-17
Release date:2017-07-12
Identifier:2,6-anhydro-3,4,5-trideoxy-4-[4-(methoxymethyl)-1H-1,2,3-triazol-1-yl]-5-[(2-methylpropanoyl)amino]-D-glycero-D-galacto -non-2-enonic acid
6YR
6YR
Name:methyl 1-seleno-2-O-methyl-beta-L-fucopyranoside
Formula:C8 H16 O4 Se
SMILES:CO[CH]1[CH](O)[CH](O)[CH](C)O[CH]1[Se]C
InChi:InChI=1S/C8H16O4Se/c1-4-5(9)6(10)7(11-2)8(12-4)13-3/h4-10H,1-3H3/t4-,5+,6+,7-,8+/m0/s1
Synonyms:2-O-methyl-methyl-seleno-L-fucopyranoside
Definition date:2016-01-04
Last modified:2020-07-17
Release date:2017-03-29
Identifier:(2S,3S,4R,5S,6R)-5-methoxy-2-methyl-6-methylselanyl-oxane-3,4-diol
D0N
D0N
Name:(2~{R},3~{R},4~{S},5~{S},6~{R})-2-[(2~{R},3~{R},4~{R},5~{S},6~{S})-4-fluoranyl-2-(hydroxymethyl)-5,6-bis(oxidanyl)oxan- 3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
Formula:C12 H21 F O10
SMILES:OC[CH]1O[CH](O[CH]2[CH](F)[CH](O)[CH](O)O[CH]2CO)[CH](O)[CH](O)[CH]1O
InChi:InChI=1S/C12H21FO10/c13-5-7(17)11(20)21-4(2-15)10(5)23-12-9(19)8(18)6(16)3(1-14)22-12/h3-12,14-20H,1-2H2/t3-,4-,5-,6-,7-,8+,9-,10-,11+,12-/m1/s1
Definition date:2017-12-15
Last modified:2020-07-17
Release date:2019-01-30
Identifier:(2~{R},3~{R},4~{S},5~{S},6~{R})-2-[(2~{R},3~{R},4~{R},5~{S},6~{S})-4-fluoranyl-2-(hydroxymethyl)-5,6-bis(oxidanyl)oxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
6ZC
6ZC
Name:4-nitrophenyl 2-acetamido-2-deoxy-alpha-D-glucopyranoside
Formula:C14 H18 N2 O8
SMILES:CC(=O)N[CH]1[CH](O)[CH](O)[CH](CO)O[CH]1Oc2ccc(cc2)[N+]([O-])=O
InChi:InChI=1S/C14H18N2O8/c1-7(18)15-11-13(20)12(19)10(6-17)24-14(11)23-9-4-2-8(3-5-9)16(21)22/h2-5,10-14,17,19-20H,6H2,1H3,(H,15,18)/t10-,11-,12-,13-,14+/m1/s1
Synonyms:N-[(2R,3R,4R,5S,6R)-6-(hydroxymethyl)-2-(4-nitrophenoxy)-4,5-bis(oxidanyl)oxan-3-yl]ethanamide
Definition date:2016-07-29
Last modified:2020-07-17
Release date:2016-08-10
Identifier:~{N}-[(2~{R},3~{R},4~{R},5~{S},6~{R})-6-(hydroxymethyl)-2-(4-nitrophenoxy)-4,5-bis(oxidanyl)oxan-3-yl]ethanamide
D1M
D1M
Name:5-ethynyl-1-(beta-D-glucopyranosyl)pyrimidine-2,4(1H,3H)-dione
Formula:C12 H14 N2 O7
SMILES:O=C1NC(=O)N(C=C1C#C)C2OC(C(O)C(O)C2O)CO
InChi:InChI=1S/C12H14N2O7/c1-2-5-3-14(12(20)13-10(5)19)11-9(18)8(17)7(16)6(4-15)21-11/h1,3,6-9,11,15-18H,4H2,(H,13,19,20)/t6-,7-,8+,9-,11-/m1/s1
Synonyms:5-ethynyl-1-(beta-D-glucosyl)pyrimidine-2,4(1H,3H)-dione
Definition date:2012-04-12
Last modified:2020-07-17
Identifier:5-ethynyl-1-(beta-D-glucopyranosyl)pyrimidine-2,4(1H,3H)-dione
73E
73E
Name:(1S)-1,5-anhydro-1-[3-(4-hydroxyphenyl)-1H-1,2,4-triazol-5-yl]-D-glucitol
Formula:C14 H17 N3 O5
SMILES:OC[CH]1O[CH]([CH](O)[CH](O)[CH]1O)c2[nH]c(nn2)c3ccccc3
InChi:InChI=1S/C14H17N3O5/c18-6-8-9(19)10(20)11(21)12(22-8)14-15-13(16-17-14)7-4-2-1-3-5-7/h1-5,8-12,18-21H,6H2,(H,15,16,17)/t8-,9-,10+,11-,12-/m1/s1
Synonyms:(2~{R},3~{S},4~{R},5~{R},6~{S})-2-(hydroxymethyl)-6-(5-phenyl-4~{H}-1,2,4-triazol-3-yl)oxane-3,4,5-triol
Definition date:2016-08-19
Last modified:2020-07-17
Release date:2017-06-14
Identifier:(2~{R},3~{S},4~{R},5~{R},6~{S})-2-(hydroxymethyl)-6-(5-phenyl-4~{H}-1,2,4-triazol-3-yl)oxane-3,4,5-triol

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon