Chemie Search results for query - Protein Data Bank Japan

English 日本語简体中文繁體中文 한국어

✖

Menu

RCSB PDB PDBe BMRB Adv. Search Search help

PDB Info pages Status search Chemie search: 856 results BIRD

DYM

DYM
Name:	(2R)-2,3-dihydroxypropyl 2-acetamido-2,4-dideoxy-alpha-L-threo-hex-4-enopyranosiduronic acid
Formula:	C11 H17 N O8
SMILES:	C(C1=CC(C(C(O1)OCC(CO)O)NC(C)=O)O)(=O)O
InChi:	InChI=1S/C11H17NO8/c1-5(14)12-9-7(16)2-8(10(17)18)20-11(9)19-4-6(15)3-13/h2,6-7,9,11,13,15-16H,3-4H2,1H3,(H,12,14)(H,17,18)/t6-,7+,9-,11-/m1/s1
Synonyms:	6-(2,3-DIHYDROXYPROPOXY)-5-ACETAMIDO-5,6-DIHYDRO-4-HYDROXY-4H-PYRAN-2-CARBOXYLIC ACID
Definition date:	2005-11-28
Last modified:	2020-07-17
Identifier:	(2R)-2,3-dihydroxypropyl 2-(acetylamino)-2,4-dideoxy-alpha-L-threo-hex-4-enopyranosiduronic acid

E3M

E3M
Name:	(1R)-4-acetamido-3-amino-1,5-anhydro-2,3,4-trideoxy-1-sulfo-D-glycero-D-galacto-octitol
Formula:	C10 H20 N2 O8 S
SMILES:	C1(OC(C(C(C1)N)NC(C)=O)C(C(CO)O)O)S(O)(=O)=O
InChi:	InChI=1S/C10H20N2O8S/c1-4(14)12-8-5(11)2-7(21(17,18)19)20-10(8)9(16)6(15)3-13/h5-10,13,15-16H,2-3,11H2,1H3,(H,12,14)(H,17,18,19)/t5-,6+,7+,8+,9+,10+/m0/s1
Synonyms:	(1R)-4-(acetylamino)-3-amino-1,5-anhydro-2,3,4-trideoxy-1-sulfo-D-glycero-D-galacto-octitol
Definition date:	2017-11-30
Last modified:	2020-07-17
Release date:	2018-03-07
Identifier:	(1R)-4-(acetylamino)-3-amino-1,5-anhydro-2,3,4-trideoxy-1-sulfo-D-glycero-D-galacto-octitol

E5G

E5G
Name:	5-hydroxypentyl alpha-D-glucopyranoside
Formula:	C11 H22 O7
SMILES:	O(CCCCCO)C1OC(C(O)C(O)C1O)CO
InChi:	InChI=1S/C11H22O7/c12-4-2-1-3-5-17-11-10(16)9(15)8(14)7(6-13)18-11/h7-16H,1-6H2/t7-,8-,9+,10-,11+/m1/s1
Synonyms:	5-hydroxypentyl alpha-D-glucoside
Definition date:	2012-01-11
Last modified:	2020-07-17
Identifier:	5-hydroxypentyl alpha-D-glucopyranoside

EAG

EAG
Name:	2-aminoethyl 2-acetamido-2-deoxy-beta-D-glucopyranoside
Formula:	C10 H20 N2 O6
SMILES:	O=C(NC1C(O)C(O)C(OC1OCCN)CO)C
InChi:	InChI=1S/C10H20N2O6/c1-5(14)12-7-9(16)8(15)6(4-13)18-10(7)17-3-2-11/h6-10,13,15-16H,2-4,11H2,1H3,(H,12,14)/t6-,7-,8-,9-,10-/m1/s1
Synonyms:	2-aminoethyl 2-(acetylamino)-2-deoxy-beta-D-glucopyranoside
Definition date:	2008-01-23
Last modified:	2020-07-17
Identifier:	2-aminoethyl 2-(acetylamino)-2-deoxy-beta-D-glucopyranoside

EBG

EBG
Name:	2-[(2S)-oxiran-2-yl]ethyl alpha-D-glucopyranoside
Formula:	C10 H18 O7
SMILES:	O(CCC1OC1)C2OC(C(O)C(O)C2O)CO
InChi:	InChI=1S/C10H18O7/c11-3-6-7(12)8(13)9(14)10(17-6)15-2-1-5-4-16-5/h5-14H,1-4H2/t5-,6+,7+,8-,9+,10-/m0/s1
Synonyms:	2-HYDROXYMETHYL-6-(2-OXIRANYL-ETHOXY)-TETRAHYDRO-PYRAN-3,4,5-TRIOL
Definition date:	2002-11-28
Last modified:	2020-07-17
Identifier:	2-[(2S)-oxiran-2-yl]ethyl alpha-D-glucopyranoside

EBQ

EBQ
Name:	(3S)-3-hydroxybutyl alpha-D-glucopyranoside
Formula:	C10 H20 O7
SMILES:	C[CH](O)CCO[CH]1O[CH](CO)[CH](O)[CH](O)[CH]1O
InChi:	InChI=1S/C10H20O7/c1-5(12)2-3-16-10-9(15)8(14)7(13)6(4-11)17-10/h5-15H,2-4H2,1H3/t5-,6+,7+,8-,9+,10-/m0/s1
Synonyms:	(2~{R},3~{S},4~{S},5~{R},6~{S})-2-(hydroxymethyl)-6-[(3~{S})-3-oxidanylbutoxy]oxane-3,4,5-triol
Definition date:	2010-06-04
Last modified:	2020-07-17
Identifier:	(2~{R},3~{S},4~{S},5~{R},6~{S})-2-(hydroxymethyl)-6-[(3~{S})-3-oxidanylbutoxy]oxane-3,4,5-triol

EEN

EEN
Name:	2-deoxy-2-[(difluoroacetyl)amino]-alpha-D-galactopyranose
Formula:	C8 H13 F2 N O6
SMILES:	OC[CH]1O[CH](O)[CH](NC(=O)C(F)F)[CH](O)[CH]1O
InChi:	InChI=1S/C8H13F2NO6/c9-6(10)7(15)11-3-5(14)4(13)2(1-12)17-8(3)16/h2-6,8,12-14,16H,1H2,(H,11,15)/t2-,3-,4+,5-,8+/m1/s1
Synonyms:	N-DIFLUOROACETYL-D-GALACTOSAMINE
Definition date:	2018-03-16
Last modified:	2020-07-17
Release date:	2019-02-20
Identifier:	2,2-bis(fluoranyl)-~{N}-[(2~{S},3~{R},4~{R},5~{R},6~{R})-6-(hydroxymethyl)-2,4,5-tris(oxidanyl)oxan-3-yl]ethanamide

EEQ

EEQ
Name:	2-deoxy-2-[(fluoroacetyl)amino]-alpha-D-galactopyranose
Formula:	C8 H14 F N O6
SMILES:	OC[CH]1O[CH](O)[CH](NC(=O)CF)[CH](O)[CH]1O
InChi:	InChI=1S/C8H14FNO6/c9-1-4(12)10-5-7(14)6(13)3(2-11)16-8(5)15/h3,5-8,11,13-15H,1-2H2,(H,10,12)/t3-,5-,6+,7-,8+/m1/s1
Synonyms:	2-fluoranyl-~{N}-[(2~{S},3~{R},4~{R},5~{R},6~{R})-6-(hydroxymethyl)-2,4,5-tris(oxidanyl)oxan-3-yl]ethanamide
Definition date:	2018-03-16
Last modified:	2020-07-17
Release date:	2019-02-20
Identifier:	2-fluoranyl-~{N}-[(2~{S},3~{R},4~{R},5~{R},6~{R})-6-(hydroxymethyl)-2,4,5-tris(oxidanyl)oxan-3-yl]ethanamide

EGA

EGA
Name:	ethyl beta-D-galactopyranoside
Formula:	C8 H16 O6
SMILES:	O(CC)C1OC(C(O)C(O)C1O)CO
InChi:	InChI=1S/C8H16O6/c1-2-13-8-7(12)6(11)5(10)4(3-9)14-8/h4-12H,2-3H2,1H3/t4-,5+,6+,7-,8-/m1/s1
Synonyms:	ethyl beta-D-galactoside
Definition date:	2014-05-22
Last modified:	2020-07-17
Release date:	2014-06-18
Identifier:	ethyl beta-D-galactopyranoside

EMP

EMP
Name:	2,4-dideoxy-4-(ethylamino)-3-O-methyl-alpha-L-threo-pentopyranose
Formula:	C8 H17 N O3
SMILES:	O(C)C1C(NCC)COC(O)C1
InChi:	InChI=1S/C8H17NO3/c1-3-9-6-5-12-8(10)4-7(6)11-2/h6-10H,3-5H2,1-2H3/t6-,7-,8+/m0/s1
Synonyms:	2,4-DIDEOXY-4-(ETHYLAMINO)-3-O-METHYL ALPHA-L-THREO-PENTOPYRANOSIDE
Definition date:	1999-07-08
Last modified:	2020-07-17
Identifier:	2,4-dideoxy-4-(ethylamino)-3-O-methyl-alpha-L-threo-pentopyranose

EMZ

EMZ
Name:	6-O-methyl-beta-D-galactopyranose
Formula:	C7 H14 O6
SMILES:	COC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
InChi:	InChI=1S/C7H14O6/c1-12-2-3-4(8)5(9)6(10)7(11)13-3/h3-11H,2H2,1H3/t3-,4+,5+,6-,7-/m1/s1
Synonyms:	6-O-Methyl-D-galactopyranose
Definition date:	2018-04-02
Last modified:	2020-07-17
Release date:	2018-11-21
Identifier:	(2~{R},3~{R},4~{S},5~{R},6~{R})-6-(methoxymethyl)oxane-2,3,4,5-tetrol

EPG

EPG
Name:	(2R)-oxiran-2-ylmethyl alpha-D-glucopyranoside
Formula:	C9 H16 O7
SMILES:	O(CC1OC1)C2OC(C(O)C(O)C2O)CO
InChi:	InChI=1S/C9H16O7/c10-1-5-6(11)7(12)8(13)9(16-5)15-3-4-2-14-4/h4-13H,1-3H2/t4-,5-,6-,7+,8-,9+/m1/s1
Synonyms:	2-HYDROXYMETHYL-6-OXIRANYLMETHOXY-TETRAHYDRO-PYRAN-3,4,5-TRIOL
Definition date:	2002-11-28
Last modified:	2020-07-17
Identifier:	(2R)-oxiran-2-ylmethyl alpha-D-glucopyranoside

EQP

EQP
Name:	(1R)-4-acetamido-1,5-anhydro-2,4-dideoxy-1-phosphono-D-glycero-D-galacto-octitol
Formula:	C10 H20 N O9 P
SMILES:	O=P(O)(O)C1OC(C(NC(=O)C)C(O)C1)C(O)C(O)CO
InChi:	InChI=1S/C10H20NO9P/c1-4(13)11-8-5(14)2-7(21(17,18)19)20-10(8)9(16)6(15)3-12/h5-10,12,14-16H,2-3H2,1H3,(H,11,13)(H2,17,18,19)/t5-,6+,7+,8+,9+,10+/m0/s1
Synonyms:	(4-ACETAMIDO-2,4-DIDEOXY-D-GLYCERO-ALPHA-D-GALACTO-1-OCTOPYRANOSYL)PHOSPHONIC ACID
Definition date:	1999-07-08
Last modified:	2020-07-17
Identifier:	(1R)-4-(acetylamino)-1,5-anhydro-2,4-dideoxy-1-phosphono-D-glycero-D-galacto-octitol

EQV

EQV
Name:	Loganic acid
Formula:	C16 H24 O10
SMILES:	CC1C(CC2C(=COC(C12)OC3C(C(C(C(O3)CO)O)O)O)C(=O)O)O
InChi:	InChI=1S/C16H24O10/c1-5-8(18)2-6-7(14(22)23)4-24-15(10(5)6)26-16-13(21)12(20)11(19)9(3-17)25-16/h4-6,8-13,15-21H,2-3H2,1H3,(H,22,23)/t5-,6+,8-,9+,10+,11+,12-,13+,15-,16-/m0/s1
Synonyms:	(1S,4aS,6S,7R,7aS)-1-(beta-D-glucopyranosyloxy)-6-hydroxy-7-methyl-1,4a,5,6,7,7a-hexahydrocyclopenta[c]pyran-4-carboxyl ic acid
Definition date:	2018-01-29
Last modified:	2020-07-17
Release date:	2018-02-07
Identifier:	(1S,4aS,6S,7R,7aS)-1-(beta-D-glucopyranosyloxy)-6-hydroxy-7-methyl-1,4a,5,6,7,7a-hexahydrocyclopenta[c]pyran-4-carboxyl ic acid

ERE

ERE
Name:	4-epi-vancosamine
Formula:	C7 H15 N O3
SMILES:	OC1OC(C(O)C(N)(C)C1)C
InChi:	InChI=1S/C7H15NO3/c1-4-6(10)7(2,8)3-5(9)11-4/h4-6,9-10H,3,8H2,1-2H3/t4-,5+,6-,7-/m0/s1
Synonyms:	(1R,3S,4R,5S)-3-amino-2,3,6-trideoxy-3-methyl-alpha-L-arabino-hexopyranose
Definition date:	2010-08-12
Last modified:	2020-07-17
Identifier:	3-amino-2,3,6-trideoxy-3-methyl-alpha-L-arabino-hexopyranose

ERI

ERI
Name:	3-C-methyl-4-O-acetyl-alpha-L-Olivopyranose
Formula:	C9 H16 O5
SMILES:	O=C(OC1C(OC(O)CC1(O)C)C)C
InChi:	InChI=1S/C9H16O5/c1-5-8(14-6(2)10)9(3,12)4-7(11)13-5/h5,7-8,11-12H,4H2,1-3H3/t5-,7+,8-,9-/m0/s1
Synonyms:	4-O-ACETYL-2,6-DIDEOXY-3-C-METHYL-BETA-L-ARABINO-HEXOPYRANOSE
Definition date:	1999-07-08
Last modified:	2020-07-17
Identifier:	4-O-acetyl-2,6-dideoxy-3-C-methyl-alpha-L-arabino-hexopyranose

ETT

ETT
Name:	5-acetamido-2,6-anhydro-3,5-dideoxy-3-[(2E)-3-(4-methylphenyl)prop-2-en-1-yl]-D-glycero-D-galacto-non-2-enonic acid
Formula:	C21 H27 N O8
SMILES:	O=C(O)C=1OC(C(O)C(O)CO)C(NC(=O)C)C(O)C=1CC=Cc2ccc(cc2)C
InChi:	InChI=1S/C21H27NO8/c1-11-6-8-13(9-7-11)4-3-5-14-17(26)16(22-12(2)24)20(18(27)15(25)10-23)30-19(14)21(28)29/h3-4,6-9,15-18,20,23,25-27H,5,10H2,1-2H3,(H,22,24)(H,28,29)/b4-3+/t15-,16-,17+,18-,20-/m1/s1
Synonyms:	5-(acetylamino)-2,6-anhydro-3,5-dideoxy-3-[(2E)-3-(4-methylphenyl)prop-2-en-1-yl]-D-glycero-D-galacto-non-2-enonic acid
Definition date:	2010-11-24
Last modified:	2020-07-17
Identifier:	5-(acetylamino)-2,6-anhydro-3,5-dideoxy-3-[(2E)-3-(4-methylphenyl)prop-2-en-1-yl]-D-glycero-D-galacto-non-2-enonic acid

F1P

F1P
Name:	1-O-phosphono-beta-D-fructopyranose
Formula:	C6 H13 O9 P
SMILES:	O=P(O)(O)OCC1(O)OCC(O)C(O)C1O
InChi:	InChI=1S/C6H13O9P/c7-3-1-14-6(10,5(9)4(3)8)2-15-16(11,12)13/h3-5,7-10H,1-2H2,(H2,11,12,13)/t3-,4-,5+,6-/m1/s1
Synonyms:	BETA-D-FRUCTOPYRANOSE-1-PHOSPHATE
Definition date:	2006-02-28
Last modified:	2020-07-17
Identifier:	1-O-phosphono-beta-D-fructopyranose

F1X

F1X
Name:	1-O-phosphono-beta-D-fructofuranose
Formula:	C6 H13 O9 P
SMILES:	O=P(OCC1(O)OC(C(O)C1O)CO)(O)O
InChi:	InChI=1S/C6H13O9P/c7-1-3-4(8)5(9)6(10,15-3)2-14-16(11,12)13/h3-5,7-10H,1-2H2,(H2,11,12,13)/t3-,4-,5+,6-/m1/s1
Synonyms:	beta D-Fructose 1-phosphate
Definition date:	2010-08-04
Last modified:	2020-07-17
Identifier:	1-O-phosphono-beta-D-fructofuranose

F55

F55
Name:	N-{[(4-chlorophenyl)carbonyl]carbamoyl}-beta-D-glucopyranosylamine
Formula:	C14 H17 Cl N2 O7
SMILES:	O=C(NC1OC(C(O)C(O)C1O)CO)NC(=O)c2ccc(Cl)cc2
InChi:	InChI=1S/C14H17ClN2O7/c15-7-3-1-6(2-4-7)12(22)16-14(23)17-13-11(21)10(20)9(19)8(5-18)24-13/h1-4,8-11,13,18-21H,5H2,(H2,16,17,22,23)/t8-,9-,10+,11-,13-/m1/s1
Synonyms:	N-{[(4-chlorophenyl)carbonyl]carbamoyl}-beta-D-glucosylamine
Definition date:	2008-02-12
Last modified:	2020-07-17
Identifier:	N-{[(4-chlorophenyl)carbonyl]carbamoyl}-beta-D-glucopyranosylamine

F58

F58
Name:	N-[(cyclohexylcarbonyl)carbamoyl]-beta-D-glucopyranosylamine
Formula:	C14 H24 N2 O7
SMILES:	O=C(NC1OC(C(O)C(O)C1O)CO)NC(=O)C2CCCCC2
InChi:	InChI=1S/C14H24N2O7/c17-6-8-9(18)10(19)11(20)13(23-8)16-14(22)15-12(21)7-4-2-1-3-5-7/h7-11,13,17-20H,1-6H2,(H2,15,16,21,22)/t8-,9-,10+,11-,13-/m1/s1
Synonyms:	N-[(cyclohexylcarbonyl)carbamoyl]-beta-D-glucosylamine
Definition date:	2012-11-22
Last modified:	2020-07-17
Release date:	2013-12-11
Identifier:	N-[(cyclohexylcarbonyl)carbamoyl]-beta-D-glucopyranosylamine

F6P

F6P
Name:	6-O-phosphono-beta-D-fructofuranose
Formula:	C6 H13 O9 P
SMILES:	O=P(O)(O)OCC1OC(O)(CO)C(O)C1O
InChi:	InChI=1S/C6H13O9P/c7-2-6(10)5(9)4(8)3(15-6)1-14-16(11,12)13/h3-5,7-10H,1-2H2,(H2,11,12,13)/t3-,4-,5+,6-/m1/s1
Synonyms:	FRUCTOSE-6-PHOSPHATE
Definition date:	1999-07-08
Last modified:	2020-07-17
Identifier:	6-O-phosphono-beta-D-fructofuranose

FBP

FBP
Name:	1,6-di-O-phosphono-beta-D-fructofuranose
Formula:	C6 H14 O12 P2
SMILES:	O=P(O)(O)OCC1OC(O)(COP(=O)(O)O)C(O)C1O
InChi:	InChI=1S/C6H14O12P2/c7-4-3(1-16-19(10,11)12)18-6(9,5(4)8)2-17-20(13,14)15/h3-5,7-9H,1-2H2,(H2,10,11,12)(H2,13,14,15)/t3-,4-,5+,6-/m1/s1
Synonyms:	BETA-FRUCTOSE-1,6-DIPHOSPHATE
Definition date:	1999-07-08
Last modified:	2020-07-17
Identifier:	1,6-di-O-phosphono-beta-D-fructofuranose

FCA

FCA
Name:	alpha-D-fucopyranose
Formula:	C6 H12 O5
SMILES:	OC1C(O)C(OC(O)C1O)C
InChi:	InChI=1S/C6H12O5/c1-2-3(7)4(8)5(9)6(10)11-2/h2-10H,1H3/t2-,3+,4+,5-,6+/m1/s1
Synonyms:	alpha-D-fucose
Definition date:	1999-07-08
Last modified:	2020-07-17
Identifier:	6-deoxy-alpha-D-galactopyranose

FCB

FCB
Name:	beta-D-fucopyranose
Formula:	C6 H12 O5
SMILES:	OC1C(O)C(OC(O)C1O)C
InChi:	InChI=1S/C6H12O5/c1-2-3(7)4(8)5(9)6(10)11-2/h2-10H,1H3/t2-,3+,4+,5-,6-/m1/s1
Synonyms:	beta-D-fucose
Definition date:	1999-07-08
Last modified:	2020-07-17
Identifier:	6-deoxy-beta-D-galactopyranose

<16 17 18 19 20 21 222324 25 26 27 28 29 30 31 >

221051

PDB entries from 2024-06-12

PDB statistics

PDBj update info

Contact PDBj

numon