Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
73E
73E
Name:(1S)-1,5-anhydro-1-[3-(4-hydroxyphenyl)-1H-1,2,4-triazol-5-yl]-D-glucitol
Formula:C14 H17 N3 O5
SMILES:OC[CH]1O[CH]([CH](O)[CH](O)[CH]1O)c2[nH]c(nn2)c3ccccc3
InChi:InChI=1S/C14H17N3O5/c18-6-8-9(19)10(20)11(21)12(22-8)14-15-13(16-17-14)7-4-2-1-3-5-7/h1-5,8-12,18-21H,6H2,(H,15,16,17)/t8-,9-,10+,11-,12-/m1/s1
Synonyms:(2~{R},3~{S},4~{R},5~{R},6~{S})-2-(hydroxymethyl)-6-(5-phenyl-4~{H}-1,2,4-triazol-3-yl)oxane-3,4,5-triol
Definition date:2016-08-19
Last modified:2020-07-17
Release date:2017-06-14
Identifier:(2~{R},3~{S},4~{R},5~{R},6~{S})-2-(hydroxymethyl)-6-(5-phenyl-4~{H}-1,2,4-triazol-3-yl)oxane-3,4,5-triol
3J3
3J3
Name:(1R)-1,5-anhydro-1-{[4-(sulfamoyloxy)piperidin-1-yl]sulfonyl}-D-galactitol
Formula:C11 H22 N2 O10 S2
SMILES:O=S(=O)(N1CCC(OS(=O)(=O)N)CC1)C2OC(C(O)C(O)C2O)CO
InChi:InChI=1S/C11H22N2O10S2/c12-25(20,21)23-6-1-3-13(4-2-6)24(18,19)11-10(17)9(16)8(15)7(5-14)22-11/h6-11,14-17H,1-5H2,(H2,12,20,21)/t7-,8+,9+,10-,11-/m1/s1
Definition date:2014-08-22
Last modified:2020-07-17
Release date:2014-10-15
Identifier:(1R)-1,5-anhydro-1-{[4-(sulfamoyloxy)piperidin-1-yl]sulfonyl}-D-galactitol
3J4
3J4
Name:(6S)-2,6-anhydro-6-{[(3R)-3-(sulfamoyloxy)pyrrolidin-1-yl]sulfonyl}-D-glucitol
Formula:C10 H20 N2 O10 S2
SMILES:O=S(=O)(N1CCC(OS(=O)(=O)N)C1)C2OC(C(O)C(O)C2O)CO
InChi:InChI=1S/C10H20N2O10S2/c11-24(19,20)22-5-1-2-12(3-5)23(17,18)10-9(16)8(15)7(14)6(4-13)21-10/h5-10,13-16H,1-4H2,(H2,11,19,20)/t5-,6?,7-,8+,9+,10+/m1/s1
Definition date:2014-08-25
Last modified:2020-07-17
Release date:2014-10-15
Identifier:(6S)-2,6-anhydro-6-{[(3R)-3-(sulfamoyloxy)pyrrolidin-1-yl]sulfonyl}-D-glucitol
3LJ
3LJ
Name:2-amino-2-deoxy-6-O-sulfo-alpha-D-glucopyranose
Formula:C6 H13 N O8 S
SMILES:O=S(=O)(O)OCC1OC(O)C(N)C(O)C1O
InChi:InChI=1S/C6H13NO8S/c7-3-5(9)4(8)2(15-6(3)10)1-14-16(11,12)13/h2-6,8-10H,1,7H2,(H,11,12,13)/t2-,3-,4-,5-,6+/m1/s1
Synonyms:N-acetyl-6-O-sulfo-alpha-D-glucosamine
Definition date:2014-09-12
Last modified:2020-07-17
Release date:2014-11-05
Identifier:2-amino-2-deoxy-6-O-sulfo-alpha-D-glucopyranose
3MG
3MG
Name:3-O-methyl-beta-D-glucopyranose
Formula:C7 H14 O6
SMILES:O(C1C(O)C(OC(O)C1O)CO)C
InChi:InChI=1S/C7H14O6/c1-12-6-4(9)3(2-8)13-7(11)5(6)10/h3-11H,2H2,1H3/t3-,4-,5-,6+,7-/m1/s1
Synonyms:3-O-methyl-beta-D-glucose
Definition date:2007-08-22
Last modified:2020-07-17
Identifier:3-O-methyl-beta-D-glucopyranose
3MK
3MK
Name:beta-L-altropyranose
Formula:C6 H12 O6
SMILES:OC1C(O)C(OC(O)C1O)CO
InChi:InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4-,5+,6-/m0/s1
Synonyms:beta-L-altrose
Definition date:2010-04-19
Last modified:2020-07-17
Release date:2020-07-29
Identifier:beta-L-altropyranose
79J
79J
Name:4-O-acetyl-5-acetamido-3,5-dideoxy-L-glycero-alpha-D-galacto-non-2-ulopyranosonic acid
Formula:C13 H21 N O10
SMILES:C(O)(=O)C1(CC(OC(C)=O)C(C(O1)C(C(CO)O)O)NC(=O)C)O
InChi:InChI=1S/C13H21NO10/c1-5(16)14-9-8(23-6(2)17)3-13(22,12(20)21)24-11(9)10(19)7(18)4-15/h7-11,15,18-19,22H,3-4H2,1-2H3,(H,14,16)(H,20,21)/t7-,8-,9+,10+,11+,13+/m0/s1
Synonyms:4-O-acetyl-5-(acetylamino)-3,5-dideoxy-L-glycero-alpha-D-galacto-non-2-ulopyranosonic acid
Definition date:2016-09-16
Last modified:2020-07-17
Release date:2017-03-22
Identifier:4-O-acetyl-5-(acetylamino)-3,5-dideoxy-L-glycero-alpha-D-galacto-non-2-ulopyranosonic acid
3R3
3R3
Name:[[[(2R,3R,4S,5R)-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]oxy-oxidanyl-phosphoryl]amino]phosphonic acid
Formula:C5 H14 N O13 P3
SMILES:O[CH]1[CH](O)[CH](O[CH]1CO[P](O)(O)=O)O[P](O)(=O)N[P](O)(O)=O
InChi:InChI=1S/C5H14NO13P3/c7-3-2(1-17-22(14,15)16)18-5(4(3)8)19-21(12,13)6-20(9,10)11/h2-5,7-8H,1H2,(H2,14,15,16)(H4,6,9,10,11,12,13)/t2-,3-,4-,5-/m1/s1
Definition date:2014-10-13
Last modified:2020-07-17
Release date:2015-12-23
Identifier:[[[(2R,3R,4S,5R)-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]oxy-oxidanyl-phosphoryl]amino]phosphonic acid
7CV
7CV
Name:6-deoxy-2,3-di-O-methyl-alpha-L-mannopyranose
Formula:C8 H16 O5
SMILES:C1(O)C(OC)C(C(C(O1)C)O)OC
InChi:InChI=1S/C8H16O5/c1-4-5(9)6(11-2)7(12-3)8(10)13-4/h4-10H,1-3H3/t4-,5-,6+,7+,8+/m0/s1
Synonyms:6-deoxy-2,3-di-O-methyl-alpha-L-mannose
Definition date:2016-10-05
Last modified:2020-07-17
Release date:2017-10-18
Identifier:6-deoxy-2,3-di-O-methyl-alpha-L-mannopyranose
3S6
3S6
Name:prop-2-en-1-yl beta-D-galactofuranoside
Formula:C9 H16 O6
SMILES:O(C/C=C)C1OC(C(O)C1O)C(O)CO
InChi:InChI=1S/C9H16O6/c1-2-3-14-9-7(13)6(12)8(15-9)5(11)4-10/h2,5-13H,1,3-4H2/t5-,6-,7-,8+,9-/m1/s1
Synonyms:prop-2-en-1-yl beta-D-galactoside
Definition date:2014-10-16
Last modified:2020-07-17
Release date:2015-07-01
Identifier:prop-2-en-1-yl beta-D-galactofuranoside
7D1
7D1
Name:1,5-anhydro-2-deoxy-D-arabino-hexitol
Formula:C6 H12 O4
SMILES:OC[CH]1OCC[CH](O)[CH]1O
InChi:InChI=1S/C6H12O4/c7-3-5-6(9)4(8)1-2-10-5/h4-9H,1-3H2/t4-,5-,6+/m1/s1
Synonyms:(2~{R},3~{S},4~{R})-2-(hydroxymethyl)oxane-3,4-diol
Definition date:2016-10-07
Last modified:2020-07-17
Release date:2017-01-11
Identifier:(2~{R},3~{S},4~{R})-2-(hydroxymethyl)oxane-3,4-diol
51N
51N
Name:5-O-[(R)-hydroxy(phosphonooxy)phosphoryl]-1-O-phosphono-alpha-D-ribofuranose
Formula:C5 H13 O14 P3
SMILES:C1(OP(O)(O)=O)OC(C(C1O)O)COP(OP(O)(O)=O)(=O)O
InChi:InChI=1S/C5H13O14P3/c6-3-2(1-16-22(14,15)19-21(11,12)13)17-5(4(3)7)18-20(8,9)10/h2-7H,1H2,(H,14,15)(H2,8,9,10)(H2,11,12,13)/t2-,3-,4-,5-/m1/s1
Synonyms:1'-ALPHA-PHOSPHORIBOSYL-5'-PYROPHOSPHORIC ACID
Definition date:2015-06-15
Last modified:2020-07-17
Release date:2016-07-20
Identifier:5-O-[(R)-hydroxy(phosphonooxy)phosphoryl]-1-O-phosphono-alpha-D-ribofuranose
3YW
3YW
Name:(2S)-2,3-dihydroxypropyl 2-acetamido-2-deoxy-alpha-D-glucopyranoside
Formula:C11 H21 N O8
SMILES:O=C(NC1C(O)C(O)C(OC1OCC(O)CO)CO)C
InChi:InChI=1S/C11H21NO8/c1-5(15)12-8-10(18)9(17)7(3-14)20-11(8)19-4-6(16)2-13/h6-11,13-14,16-18H,2-4H2,1H3,(H,12,15)/t6-,7+,8+,9+,10+,11-/m0/s1
Synonyms:(2S)-2,3-dihydroxypropyl 2-(acetylamino)-2-deoxy-alpha-D-glucopyranoside
Definition date:2014-12-10
Last modified:2020-07-17
Release date:2015-02-25
Identifier:(2S)-2,3-dihydroxypropyl 2-(acetylamino)-2-deoxy-alpha-D-glucopyranoside
56N
56N
Name:phenyl beta-D-galactopyranoside
Formula:C12 H16 O6
SMILES:OC1C(OC(C(O)C1O)CO)Oc2ccccc2
InChi:InChI=1S/C12H16O6/c13-6-8-9(14)10(15)11(16)12(18-8)17-7-4-2-1-3-5-7/h1-5,8-16H,6H2/t8-,9+,10+,11-,12-/m1/s1
Synonyms:phenyl beta-D-galactoside
Definition date:2015-08-05
Last modified:2020-07-17
Release date:2015-11-25
Identifier:phenyl beta-D-galactopyranoside
57S
57S
Name:4-O-[2-acetamido-2-deoxy-beta-D-glucopyranosyl]-5-O-phosphono-D-ribitol
Formula:C13 H26 N O13 P
SMILES:C1(C(NC(C)=O)C(C(C(O1)CO)O)O)OC(COP(O)(O)=O)C(O)C(CO)O
InChi:InChI=1S/C13H26NO13P/c1-5(17)14-9-12(21)11(20)7(3-16)26-13(9)27-8(4-25-28(22,23)24)10(19)6(18)2-15/h6-13,15-16,18-21H,2-4H2,1H3,(H,14,17)(H2,22,23,24)/t6-,7+,8+,9+,10-,11+,12+,13-/m0/s1
Synonyms:4-O-[2-(acetylamino)-2-deoxy-beta-D-glucopyranosyl]-5-O-phosphono-D-ribitol
Definition date:2015-08-12
Last modified:2020-07-17
Release date:2015-11-11
Identifier:4-O-[2-(acetylamino)-2-deoxy-beta-D-glucopyranosyl]-5-O-phosphono-D-ribitol
445
445
Name:N-[oxo(phenylamino)acetyl]-beta-D-glucopyranosylamine
Formula:C14 H18 N2 O7
SMILES:O=C(NC1OC(C(O)C(O)C1O)CO)C(=O)Nc2ccccc2
InChi:InChI=1S/C14H18N2O7/c17-6-8-9(18)10(19)11(20)14(23-8)16-13(22)12(21)15-7-4-2-1-3-5-7/h1-5,8-11,14,17-20H,6H2,(H,15,21)(H,16,22)/t8-,9-,10+,11-,14-/m1/s1
Synonyms:N-[oxo(phenylamino)acetyl]-beta-D-glucosylamine
Definition date:2008-04-23
Last modified:2020-07-17
Identifier:N-[oxo(phenylamino)acetyl]-beta-D-glucopyranosylamine
5DI
5DI
Name:alpha-D-threo-hexo-2,5-diulo-2,6-pyranosyl fluoride
Formula:C6 H9 F O5
SMILES:O=C1C(O)C(O)C(F)(OC1)CO
InChi:InChI=1S/C6H9FO5/c7-6(2-8)5(11)4(10)3(9)1-12-6/h4-5,8,10-11H,1-2H2/t4-,5+,6+/m1/s1
Synonyms:2-OXO-1,2,DIDEOXY-5F-D-IDOPYRANOSE
Definition date:2012-03-14
Last modified:2020-07-17
Release date:2013-03-27
Identifier:alpha-D-threo-hexo-2,5-diulo-2,6-pyranosyl fluoride
475
475
Name:N-[oxo(pyridin-2-ylamino)acetyl]-beta-D-glucopyranosylamine
Formula:C13 H17 N3 O7
SMILES:O=C(NC1OC(C(O)C(O)C1O)CO)C(=O)Nc2ncccc2
InChi:InChI=1S/C13H17N3O7/c17-5-6-8(18)9(19)10(20)13(23-6)16-12(22)11(21)15-7-3-1-2-4-14-7/h1-4,6,8-10,13,17-20H,5H2,(H,16,22)(H,14,15,21)/t6-,8-,9+,10-,13-/m1/s1
Synonyms:N-[oxo(pyridin-2-ylamino)acetyl]-beta-D-glucosylamine
Definition date:2008-04-23
Last modified:2020-07-17
Identifier:N-[oxo(pyridin-2-ylamino)acetyl]-beta-D-glucopyranosylamine
491
491
Name:2-acetamido-3-O-[(1R)-1-carboxyethyl]-2-deoxy-1-O-phosphono-alpha-D-glucopyranose
Formula:C11 H20 N O11 P
SMILES:O=C(O)C(OC1C(O)C(OC(OP(=O)(O)O)C1NC(=O)C)CO)C
InChi:InChI=1S/C11H20NO11P/c1-4(10(16)17)21-9-7(12-5(2)14)11(23-24(18,19)20)22-6(3-13)8(9)15/h4,6-9,11,13,15H,3H2,1-2H3,(H,12,14)(H,16,17)(H2,18,19,20)/t4-,6-,7-,8-,9-,11-/m1/s1
Synonyms:2-(acetylamino)-3-O-[(1R)-1-carboxyethyl]-2-deoxy-1-O-phosphono-alpha-D-glucopyranose
Definition date:2015-02-16
Last modified:2020-07-17
Release date:2015-03-18
Identifier:2-(acetylamino)-3-O-[(1R)-1-carboxyethyl]-2-deoxy-1-O-phosphono-alpha-D-glucopyranose
49A
49A
Name:4,9-AMINO-2,4-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID
Formula:C11 H19 N3 O6
SMILES:O=C(O)C=1OC(C(O)C(O)CN)C(NC(=O)C)C(C=1)N
InChi:InChI=1S/C11H19N3O6/c1-4(15)14-8-5(13)2-7(11(18)19)20-10(8)9(17)6(16)3-12/h2,5-6,8-10,16-17H,3,12-13H2,1H3,(H,14,15)(H,18,19)/t5-,6+,8+,9+,10+/m0/s1
Definition date:2000-07-26
Last modified:2020-07-17
Identifier:5-(acetylamino)-4,9-diamino-2,6-anhydro-3,4,5,9-tetradeoxy-D-glycero-D-galacto-non-2-enonic acid
49S
49S
Name:2-acetamido-2-deoxy-beta-D-mannopyranuronic acid
Formula:C8 H13 N O7
SMILES:O=C(O)C1OC(O)C(NC(=O)C)C(O)C1O
InChi:InChI=1S/C8H13NO7/c1-2(10)9-3-4(11)5(12)6(7(13)14)16-8(3)15/h3-6,8,11-12,15H,1H3,(H,9,10)(H,13,14)/t3-,4+,5-,6-,8+/m0/s1
Synonyms:2-(acetylamino)-2-deoxy-beta-D-mannopyranuronic acid
Definition date:2015-02-18
Last modified:2020-07-17
Release date:2017-02-01
Identifier:2-(acetylamino)-2-deoxy-beta-D-mannopyranuronic acid
49T
49T
Name:2-acetamido-2-deoxy-alpha-D-fucopyranose
Formula:C8 H15 N O5
SMILES:O=C(NC1C(O)C(O)C(OC1O)C)C
InChi:InChI=1S/C8H15NO5/c1-3-6(11)7(12)5(8(13)14-3)9-4(2)10/h3,5-8,11-13H,1-2H3,(H,9,10)/t3-,5-,6+,7-,8+/m1/s1
Synonyms:2-acetamido-2,6-deoxy-alpha-D-galactopyranose
Definition date:2015-02-18
Last modified:2020-07-17
Release date:2017-02-01
Identifier:2-(acetylamino)-2,6-dideoxy-alpha-D-galactopyranose
49V
49V
Name:2-acetamido-2,4-dideoxy-alpha-L-erythro-hex-4-enopyranuronic acid
Formula:C8 H11 N O6
SMILES:O=C(O)C=1OC(O)C(NC(=O)C)C(O)C=1
InChi:InChI=1S/C8H11NO6/c1-3(10)9-6-4(11)2-5(7(12)13)15-8(6)14/h2,4,6,8,11,14H,1H3,(H,9,10)(H,12,13)/t4-,6-,8?/m0/s1
Synonyms:2-(acetylamino)-2,4-dideoxy-alpha-L-erythro-hex-4-enopyranuronic acid
Definition date:2015-02-18
Last modified:2020-07-17
Release date:2017-02-01
Identifier:2-(acetylamino)-2,4-dideoxy-alpha-L-erythro-hex-4-enopyranuronic acid
4AM
4AM
Name:4-AMINO-2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID
Formula:C11 H18 N2 O7
SMILES:O=C(O)C=1OC(C(O)C(O)CO)C(NC(=O)C)C(C=1)N
InChi:InChI=1S/C11H18N2O7/c1-4(15)13-8-5(12)2-7(11(18)19)20-10(8)9(17)6(16)3-14/h2,5-6,8-10,14,16-17H,3,12H2,1H3,(H,13,15)(H,18,19)/t5-,6+,8+,9+,10+/m0/s1
Synonyms:4-amino-Neu5Ac2en
Definition date:1999-07-08
Last modified:2020-07-17
Identifier:5-(acetylamino)-4-amino-2,6-anhydro-3,4,5-trideoxy-D-glycero-D-galacto-non-2-enonic acid
CBF
CBF
Name:(2R,3R,4S,5S,6R)-2,3,4,5-tetrahydroxy-6-(hydroxymethyl)oxane-2-carboxamide
Formula:C7 H13 N O7
SMILES:O=C(N)C1(O)OC(C(O)C(O)C1O)CO
InChi:InChI=1S/C7H13NO7/c8-6(13)7(14)5(12)4(11)3(10)2(1-9)15-7/h2-5,9-12,14H,1H2,(H2,8,13)/t2-,3-,4+,5-,7-/m1/s1
Synonyms:C-(1-HYDROGYL-BETA-D-GLUCOPYRANOSYL) FORMAMIDE
Definition date:2003-05-01
Last modified:2020-07-17
Identifier:(2R,3R,4S,5S,6R)-2,3,4,5-tetrahydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-carboxamide (non-preferred name)

243911

PDB entries from 2025-10-29

PDB statisticsPDBj update infoContact PDBjnumon