Chemie Search results for query - Protein Data Bank Japan

English 日本語简体中文繁體中文 한국어

✖

Menu

RCSB PDB PDBe BMRB Adv. Search Search help

PDB Info pages Status search Chemie search: 909 results BIRD

ASC

ASC
Name:	ASCORBIC ACID
Formula:	C6 H8 O6
SMILES:	O=C1OC(C(O)=C1O)C(O)CO
InChi:	InChI=1S/C6H8O6/c7-1-2(8)5-3(9)4(10)6(11)12-5/h2,5,7-10H,1H2/t2-,5+/m0/s1
Synonyms:	Vitamin C
Definition date:	1999-07-08
Last modified:	2020-07-17
Identifier:	(5R)-5-[(1S)-1,2-dihydroxyethyl]-3,4-dihydroxyfuran-2(5H)-one (non-preferred name)

ASG

ASG
Name:	2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose
Formula:	C8 H15 N O9 S
SMILES:	O=S(=O)(O)OC1C(OC(O)C(NC(=O)C)C1O)CO
InChi:	InChI=1S/C8H15NO9S/c1-3(11)9-5-6(12)7(18-19(14,15)16)4(2-10)17-8(5)13/h4-8,10,12-13H,2H2,1H3,(H,9,11)(H,14,15,16)/t4-,5-,6-,7+,8-/m1/s1
Synonyms:	2-DEOXY-2-ACETAMIDO-BETA-D-GALACTOSE-4-SULFATE
Definition date:	1999-07-08
Last modified:	2020-07-17
Identifier:	2-(acetylamino)-2-deoxy-4-O-sulfo-beta-D-galactopyranose

22O

22O
Name:	N-({(2E)-2-[(3-bromophenyl)methylidene]hydrazino}carbonothioyl)-beta-D-glucopyranosylamine
Formula:	C14 H18 Br N3 O5 S
SMILES:	S=C(NC1OC(C(O)C(O)C1O)CO)N/N=C/c2cccc(Br)c2
InChi:	InChI=1S/C14H18BrN3O5S/c15-8-3-1-2-7(4-8)5-16-18-14(24)17-13-12(22)11(21)10(20)9(6-19)23-13/h1-5,9-13,19-22H,6H2,(H2,17,18,24)/b16-5+/t9-,10-,11+,12-,13-/m1/s1
Synonyms:	3-bromobenzaldehyde-4-(beta-D-glucopyranosyl) thiosemicarbazone
Definition date:	2010-05-03
Last modified:	2020-07-17
Identifier:	N-{[(2E)-2-(3-bromobenzylidene)hydrazinyl]carbothioyl}-beta-D-glucopyranosylamine

22S

22S
Name:	N-({(2E)-2-[(2-chlorophenyl)methylidene]hydrazino}carbonothioyl)-beta-D-glucopyranosylamine
Formula:	C14 H18 Cl N3 O5 S
SMILES:	S=C(NC1OC(C(O)C(O)C1O)CO)N/N=C/c2ccccc2Cl
InChi:	InChI=1S/C14H18ClN3O5S/c15-8-4-2-1-3-7(8)5-16-18-14(24)17-13-12(22)11(21)10(20)9(6-19)23-13/h1-5,9-13,19-22H,6H2,(H2,17,18,24)/b16-5+/t9-,10-,11+,12-,13-/m1/s1
Synonyms:	2-chlorobenzaldehyde-4-(beta-D-glucopyranosyl) thiosemicarbazone
Definition date:	2010-04-30
Last modified:	2020-07-17
Identifier:	N-{[(2E)-2-(2-chlorobenzylidene)hydrazinyl]carbothioyl}-beta-D-glucopyranosylamine

23V

23V
Name:	N-({(2E)-2-[(3-chlorophenyl)methylidene]hydrazino}carbonothioyl)-beta-D-glucopyranosylamine
Formula:	C14 H18 Cl N3 O5 S
SMILES:	S=C(NC1OC(C(O)C(O)C1O)CO)N/N=C/c2cccc(Cl)c2
InChi:	InChI=1S/C14H18ClN3O5S/c15-8-3-1-2-7(4-8)5-16-18-14(24)17-13-12(22)11(21)10(20)9(6-19)23-13/h1-5,9-13,19-22H,6H2,(H2,17,18,24)/b16-5+/t9-,10-,11+,12-,13-/m1/s1
Synonyms:	3-chlorobenzaldehyde-4-(beta-D-glucopyranosyl) thiosemicarbazone
Definition date:	2010-05-03
Last modified:	2020-07-17
Identifier:	N-{[(2E)-2-(3-chlorobenzylidene)hydrazinyl]carbothioyl}-beta-D-glucopyranosylamine

24S

24S
Name:	N-({(2Z)-2-[(2-nitrophenyl)methylidene]hydrazino}carbonothioyl)-beta-D-glucopyranosylamine
Formula:	C14 H18 N4 O7 S
SMILES:	S=C(NC1OC(C(O)C(O)C1O)CO)N/N=Cc2ccccc2[N+]([O-])=O
InChi:	InChI=1S/C14H18N4O7S/c19-6-9-10(20)11(21)12(22)13(25-9)16-14(26)17-15-5-7-3-1-2-4-8(7)18(23)24/h1-5,9-13,19-22H,6H2,(H2,16,17,26)/b15-5-/t9-,10-,11+,12-,13-/m1/s1
Synonyms:	2-nitrobenzaldehyde-4-(beta-D-glucopyranosyl) thiosemicarbazone
Definition date:	2010-05-03
Last modified:	2020-07-17
Identifier:	N-{[(2Z)-2-(2-nitrobenzylidene)hydrazinyl]carbothioyl}-beta-D-glucopyranosylamine

25E

25E
Name:	N-({(2Z)-2-[(4-hydroxyphenyl)methylidene]hydrazino}carbonothioyl)-beta-D-glucopyranosylamine
Formula:	C14 H19 N3 O6 S
SMILES:	S=C(NC1OC(C(O)C(O)C1O)CO)N/N=Cc2ccc(O)cc2
InChi:	InChI=1S/C14H19N3O6S/c18-6-9-10(20)11(21)12(22)13(23-9)16-14(24)17-15-5-7-1-3-8(19)4-2-7/h1-5,9-13,18-22H,6H2,(H2,16,17,24)/b15-5-/t9-,10-,11+,12-,13-/m1/s1
Synonyms:	4-hydroxybenzaldehyde-4-(beta-D-glucopyranosyl) thiosemicarbazone
Definition date:	2010-05-03
Last modified:	2020-07-17
Identifier:	N-{[(2Z)-2-(4-hydroxybenzylidene)hydrazinyl]carbothioyl}-beta-D-glucopyranosylamine

AXP

AXP
Name:	(1S)-4-acetamido-1,5-anhydro-2,4-dideoxy-1-phosphono-D-glycero-D-galacto-octitol
Formula:	C10 H20 N O9 P
SMILES:	O=P(O)(O)C1OC(C(NC(=O)C)C(O)C1)C(O)C(O)CO
InChi:	InChI=1S/C10H20NO9P/c1-4(13)11-8-5(14)2-7(21(17,18)19)20-10(8)9(16)6(15)3-12/h5-10,12,14-16H,2-3H2,1H3,(H,11,13)(H2,17,18,19)/t5-,6+,7-,8+,9+,10+/m0/s1
Synonyms:	4-ACETAMIDO-2,4-DIDEXOY-D-GLYCERO-BETA-D-GALACTO-OCTOPYRANOSYLPHOSPHONIC ACID (AN AXIAL PHOSPHONATE)
Definition date:	1999-07-08
Last modified:	2020-07-17
Identifier:	(1S)-4-(acetylamino)-1,5-anhydro-2,4-dideoxy-1-phosphono-D-glycero-D-galacto-octitol

AXR

AXR
Name:	methyl alpha-D-arabinofuranoside
Formula:	C6 H12 O5
SMILES:	OC1C(OC(OC)C1O)CO
InChi:	InChI=1S/C6H12O5/c1-10-6-5(9)4(8)3(2-7)11-6/h3-9H,2H2,1H3/t3-,4-,5+,6+/m1/s1
Synonyms:	1-O-methyl-alpha-D-arabinofuranoside
Definition date:	2009-06-03
Last modified:	2020-07-17
Identifier:	methyl alpha-D-arabinofuranoside

26O

26O
Name:	N-({(2E)-2-[(2-hydroxyphenyl)methylidene]hydrazino}carbonothioyl)-beta-D-glucopyranosylamine
Formula:	C14 H19 N3 O6 S
SMILES:	S=C(NC1OC(C(O)C(O)C1O)CO)N/N=C/c2ccccc2O
InChi:	InChI=1S/C14H19N3O6S/c18-6-9-10(20)11(21)12(22)13(23-9)16-14(24)17-15-5-7-3-1-2-4-8(7)19/h1-5,9-13,18-22H,6H2,(H2,16,17,24)/b15-5+/t9-,10-,11+,12-,13-/m1/s1
Synonyms:	2-hydroxybenzaldehyde-4-(beta-D-glucopyranosyl) thiosemicarbazone
Definition date:	2010-06-07
Last modified:	2020-07-17
Identifier:	N-{[(2E)-2-(2-hydroxybenzylidene)hydrazinyl]carbothioyl}-beta-D-glucopyranosylamine

AY9

AY9
Name:	Ascopyrone M
Formula:	C6 H8 O4
SMILES:	O=C1C(O)=CC(OC1)CO
InChi:	InChI=1S/C6H8O4/c7-2-4-1-5(8)6(9)3-10-4/h1,4,7-8H,2-3H2/t4-/m0/s1
Definition date:	2011-11-15
Last modified:	2020-07-17
Identifier:	(6S)-4-hydroxy-6-(hydroxymethyl)-2H-pyran-3(6H)-one

AZC

AZC
Name:	N-(acetylcarbamoyl)-beta-D-glucopyranosylamine
Formula:	C9 H16 N2 O7
SMILES:	O=C(NC1OC(C(O)C(O)C1O)CO)NC(=O)C
InChi:	InChI=1S/C9H16N2O7/c1-3(13)10-9(17)11-8-7(16)6(15)5(14)4(2-12)18-8/h4-8,12,14-16H,2H2,1H3,(H2,10,11,13,17)/t4-,5-,6+,7-,8-/m1/s1
Synonyms:	N-ACETYL-N'-BETA-D-GLUCOPYRANOSYL UREA
Definition date:	2001-09-21
Last modified:	2020-07-17
Identifier:	N-(acetylcarbamoyl)-beta-D-glucopyranosylamine

291

291
Name:	prop-2-en-1-yl 7-O-carbamoyl-L-glycero-alpha-D-manno-heptopyranoside
Formula:	C11 H19 N O8
SMILES:	O=C(OCC(O)C1OC(OC/C=C)C(O)C(O)C1O)N
InChi:	InChI=1S/C11H19NO8/c1-2-3-18-10-8(16)6(14)7(15)9(20-10)5(13)4-19-11(12)17/h2,5-10,13-16H,1,3-4H2,(H2,12,17)/t5-,6-,7-,8-,9+,10-/m0/s1
Synonyms:	prop-2-en-1-yl 7-O-carbamoyl-L-glycero-alpha-D-manno-heptoside
Definition date:	2007-11-09
Last modified:	2020-07-17
Identifier:	prop-2-en-1-yl 7-O-carbamoyl-L-glycero-alpha-D-manno-heptopyranoside

293

293
Name:	2-deoxy-beta-L-galacto-heptopyranose
Formula:	C7 H14 O6
SMILES:	OC1C(OC(O)CC1O)C(O)CO
InChi:	InChI=1S/C7H14O6/c8-2-4(10)7-6(12)3(9)1-5(11)13-7/h3-12H,1-2H2/t3-,4+,5+,6+,7-/m1/s1
Synonyms:	(2S,4R,5S,6R)-6-((S)-1,2-dihydroxyethyl)tetrahydro-2H-pyran-2,4,5-triol
Definition date:	2007-11-09
Last modified:	2020-07-17
Identifier:	2-deoxy-beta-L-galacto-heptopyranose

DDA

DDA
Name:	beta-D-Olivopyranose
Formula:	C6 H12 O4
SMILES:	OC1C(OC(O)CC1O)C
InChi:	InChI=1S/C6H12O4/c1-3-6(9)4(7)2-5(8)10-3/h3-9H,2H2,1H3/t3-,4-,5-,6-/m1/s1
Synonyms:	beta-D-Olivose
Definition date:	1999-07-08
Last modified:	2020-07-17
Identifier:	2,6-dideoxy-beta-D-arabino-hexopyranose

DDL

DDL
Name:	2,6-dideoxy-beta-D-galactopyranose
Formula:	C6 H12 O4
SMILES:	OC1C(OC(O)CC1O)C
InChi:	InChI=1S/C6H12O4/c1-3-6(9)4(7)2-5(8)10-3/h3-9H,2H2,1H3/t3-,4-,5-,6+/m1/s1
Synonyms:	2,6-DIDEOXY-BETA-D-GALACTOSE
Definition date:	1999-07-08
Last modified:	2020-07-17
Identifier:	2,6-dideoxy-beta-D-lyxo-hexopyranose

DEG

DEG
Name:	butyl alpha-D-mannopyranoside
Formula:	C10 H20 O6
SMILES:	O(CCCC)C1OC(C(O)C(O)C1O)CO
InChi:	InChI=1S/C10H20O6/c1-2-3-4-15-10-9(14)8(13)7(12)6(5-11)16-10/h6-14H,2-5H2,1H3/t6-,7-,8+,9+,10+/m1/s1
Synonyms:	BUTYL-A-D-MANNOSE
Definition date:	2004-02-05
Last modified:	2020-07-17
Identifier:	butyl alpha-D-mannopyranoside

DGO

DGO
Name:	D-glucal
Formula:	C6 H10 O4
SMILES:	C=1OC(C(C(C=1)O)O)CO
InChi:	InChI=1S/C6H10O4/c7-3-5-6(9)4(8)1-2-10-5/h1-2,4-9H,3H2/t4-,5-,6+/m1/s1
Definition date:	2016-01-14
Last modified:	2020-07-17
Release date:	2016-07-27
Identifier:	1,5-anhydro-2-deoxy-D-arabino-hex-1-enitol

DGS

DGS
Name:	3,6-anhydro-2-O-sulfo-alpha-D-galactopyranose
Formula:	C6 H10 O8 S
SMILES:	O=S(=O)(O)OC1C2OCC(OC1O)C2O
InChi:	InChI=1S/C6H10O8S/c7-3-2-1-12-4(3)5(6(8)13-2)14-15(9,10)11/h2-8H,1H2,(H,9,10,11)/t2-,3+,4+,5-,6+/m1/s1
Synonyms:	3,6-ANHYDRO-D-GALACTOSE-2-SULFATE
Definition date:	2001-01-24
Last modified:	2020-07-17
Identifier:	3,6-anhydro-2-O-sulfo-alpha-D-galactopyranose

DGU

DGU
Name:	D-galacturonic acid
Formula:	C6 H10 O7
SMILES:	O=C(O)C(O)C(O)C(O)C(O)C=O
InChi:	InChI=1S/C6H10O7/c7-1-2(8)3(9)4(10)5(11)6(12)13/h1-5,8-11H,(H,12,13)/t2-,3+,4+,5-/m0/s1
Synonyms:	D-Galacturonate
Definition date:	2011-03-23
Last modified:	2020-07-17
Identifier:	D-galacturonic acid

2F8

2F8
Name:	methyl 2-acetamido-2-deoxy-alpha-D-glucopyranoside
Formula:	C9 H17 N O6
SMILES:	O=C(NC1C(O)C(O)C(OC1OC)CO)C
InChi:	InChI=1S/C9H17NO6/c1-4(12)10-6-8(14)7(13)5(3-11)16-9(6)15-2/h5-9,11,13-14H,3H2,1-2H3,(H,10,12)/t5-,6-,7-,8-,9+/m1/s1
Synonyms:	methyl 2-(acetylamino)-2-deoxy-alpha-D-glucopyranoside
Definition date:	2013-10-08
Last modified:	2020-07-17
Release date:	2013-11-20
Identifier:	methyl 2-(acetylamino)-2-deoxy-alpha-D-glucopyranoside

DJB

DJB
Name:	3-O-acetyl-2-acetamido-2-deoxy-alpha-D-galactopyranuronic acid
Formula:	C10 H15 N O8
SMILES:	CC(=O)N[CH]1[CH](O)O[CH]([CH](O)[CH]1OC(C)=O)C(O)=O
InChi:	InChI=1S/C10H15NO8/c1-3(12)11-5-7(18-4(2)13)6(14)8(9(15)16)19-10(5)17/h5-8,10,14,17H,1-2H3,(H,11,12)(H,15,16)/t5-,6-,7-,8+,10+/m1/s1
Synonyms:	alpha-D-2-N-acetyl-3-O-acetylgalactosaminuronic acid
Definition date:	2018-01-18
Last modified:	2020-07-17
Release date:	2018-05-02
Identifier:	(2~{S},3~{R},4~{R},5~{R},6~{S})-5-acetamido-4-acetyloxy-3,6-bis(oxidanyl)oxane-2-carboxylic acid

DJE

DJE
Name:	2-acetamido-2-deoxy-alpha-D-galactopyranuronic acid
Formula:	C8 H13 N O7
SMILES:	CC(=O)N[CH]1[CH](O)O[CH]([CH](O)[CH]1O)C(O)=O
InChi:	InChI=1S/C8H13NO7/c1-2(10)9-3-4(11)5(12)6(7(13)14)16-8(3)15/h3-6,8,11-12,15H,1H3,(H,9,10)(H,13,14)/t3-,4-,5-,6+,8+/m1/s1
Synonyms:	alpha-D-2-N-acetylgalactosaminuronic acid
Definition date:	2018-01-18
Last modified:	2020-07-17
Release date:	2018-05-02
Identifier:	(2~{S},3~{R},4~{R},5~{R},6~{S})-5-acetamido-3,4,6-tris(oxidanyl)oxane-2-carboxylic acid

DK4

DK4
Name:	1-(3-deoxy-3-fluoro-beta-D-glucopyranosyl)-5-fluoropyrimidine-2,4(1H,3H)-dione
Formula:	C10 H12 F2 N2 O6
SMILES:	OC[CH]1O[CH]([CH](O)[CH](F)[CH]1O)N2C=C(F)C(=O)NC2=O
InChi:	InChI=1S/C10H12F2N2O6/c11-3-1-14(10(19)13-8(3)18)9-7(17)5(12)6(16)4(2-15)20-9/h1,4-7,9,15-17H,2H2,(H,13,18,19)/t4-,5+,6-,7-,9-/m1/s1
Synonyms:	1-(3-deoxy-3-fluoro-beta-D-glucosyl)-5-fluoropyrimidine-2,4(1H,3H)-dione
Definition date:	2010-01-13
Last modified:	2020-07-17
Identifier:	5-fluoro-1-[(2R,3S,4S,5R,6R)-4-fluoro-3,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]pyrimidine-2,4-dione

2GL

2GL
Name:	4-O-acetyl-2,6-dideoxy-beta-D-galactopyranose
Formula:	C8 H14 O5
SMILES:	O=C(OC1C(OC(O)CC1O)C)C
InChi:	InChI=1S/C8H14O5/c1-4-8(13-5(2)9)6(10)3-7(11)12-4/h4,6-8,10-11H,3H2,1-2H3/t4-,6-,7-,8+/m1/s1
Synonyms:	4-O-ACETYL-2,6-DIDEOXY-ALPHA-D-GALACTO-HEXOPYRANOSE
Definition date:	1999-07-08
Last modified:	2020-07-17
Identifier:	4-O-acetyl-2,6-dideoxy-beta-D-lyxo-hexopyranose

<13 14 15 16 17 18 192021 22 23 24 25 26 27 28 >

243911

PDB entries from 2025-10-29

PDB statistics

PDBj update info

Contact PDBj

numon