Chemie Search results for query - Protein Data Bank Japan

English 日本語简体中文繁體中文 한국어

✖

Menu

RCSB PDB PDBe BMRB Adv. Search Search help

PDB Info pages Status search Chemie search: 856 results BIRD

RUG

RUG
Name:	1-beta-D-glucopyranosyl-4-(hydroxymethyl)-1H-1,2,3-triazole
Formula:	C9 H15 N3 O6
SMILES:	n1nn(cc1CO)C2OC(C(O)C(O)C2O)CO
InChi:	InChI=1S/C9H15N3O6/c13-2-4-1-12(11-10-4)9-8(17)7(16)6(15)5(3-14)18-9/h1,5-9,13-17H,2-3H2/t5-,6-,7+,8-,9-/m1/s1
Synonyms:	1-beta-D-glucosyl-4-(hydroxymethyl)-1H-1,2,3-triazole
Definition date:	2009-02-05
Last modified:	2020-07-17
Identifier:	1-beta-D-glucopyranosyl-4-(hydroxymethyl)-1H-1,2,3-triazole

ARA

ARA
Name:	alpha-L-arabinopyranose
Formula:	C5 H10 O5
SMILES:	OC1C(O)COC(O)C1O
InChi:	InChI=1S/C5H10O5/c6-2-1-10-5(9)4(8)3(2)7/h2-9H,1H2/t2-,3-,4+,5+/m0/s1
Synonyms:	alpha-L-arabinose
Definition date:	1999-07-08
Last modified:	2020-07-17
Identifier:	alpha-L-arabinopyranose

RGG

RGG
Name:	(2R)-2,3-dihydroxypropyl beta-D-galactopyranoside
Formula:	C9 H18 O8
SMILES:	O(CC(O)CO)C1OC(C(O)C(O)C1O)CO
InChi:	InChI=1S/C9H18O8/c10-1-4(12)3-16-9-8(15)7(14)6(13)5(2-11)17-9/h4-15H,1-3H2/t4-,5-,6+,7+,8-,9-/m1/s1
Synonyms:	(2R)-glyceryl-beta-D-galactopyranoside
Definition date:	2009-02-19
Last modified:	2020-07-17
Identifier:	(2R)-2,3-dihydroxypropyl beta-D-galactopyranoside

ARB

ARB
Name:	beta-L-arabinopyranose
Formula:	C5 H10 O5
SMILES:	OC1C(O)COC(O)C1O
InChi:	InChI=1S/C5H10O5/c6-2-1-10-5(9)4(8)3(2)7/h2-9H,1H2/t2-,3-,4+,5-/m0/s1
Synonyms:	beta-L-arabinose
Definition date:	1999-07-08
Last modified:	2020-07-17
Identifier:	beta-L-arabinopyranose

RUU

RUU
Name:	alpha-L-ribulofuranose
Formula:	C5 H10 O5
SMILES:	OCC1(O)OCC(O)C1O
InChi:	InChI=1S/C5H10O5/c6-2-5(9)4(8)3(7)1-10-5/h3-4,6-9H,1-2H2/t3-,4-,5+/m0/s1
Synonyms:	alpha-L-ribulose
Definition date:	2013-12-05
Last modified:	2020-07-17
Release date:	2014-05-28
Identifier:	alpha-L-ribulofuranose

SA0

SA0
Name:	2-(hydroxymethyl)phenyl beta-D-glucopyranoside
Formula:	C13 H18 O7
SMILES:	O(c1c(cccc1)CO)C2OC(C(O)C(O)C2O)CO
InChi:	InChI=1S/C13H18O7/c14-5-7-3-1-2-4-8(7)19-13-12(18)11(17)10(16)9(6-15)20-13/h1-4,9-18H,5-6H2/t9-,10-,11+,12-,13-/m1/s1
Synonyms:	Salicin
Definition date:	2011-10-14
Last modified:	2020-07-17
Identifier:	2-(hydroxymethyl)phenyl beta-D-glucopyranoside

LRH

LRH
Name:	6-deoxy-beta-L-fructofuranose
Formula:	C6 H12 O5
SMILES:	OC1C(O)C(OC1(O)CO)C
InChi:	InChI=1S/C6H12O5/c1-3-4(8)5(9)6(10,2-7)11-3/h3-5,7-10H,2H2,1H3/t3-,4-,5+,6-/m0/s1
Synonyms:	6-deoxy-beta-L-fructose
Definition date:	2007-04-13
Last modified:	2020-07-17
Identifier:	6-deoxy-beta-L-fructofuranose

ARI

ARI
Name:	(2R,3R,6R)-6-hydroxy-2-methyltetrahydro-2H-pyran-3-yl acetate
Formula:	C8 H14 O4
SMILES:	O=C(OC1C(OC(O)CC1)C)C
InChi:	InChI=1S/C8H14O4/c1-5-7(12-6(2)9)3-4-8(10)11-5/h5,7-8,10H,3-4H2,1-2H3/t5-,7-,8-/m1/s1
Synonyms:	[O4]-ACETOXY-2,3-DIDEOXYFUCOSE
Definition date:	1999-07-08
Last modified:	2020-07-17
Identifier:	(2R,3R,6R)-6-hydroxy-2-methyltetrahydro-2H-pyran-3-yl acetate

ARW

ARW
Name:	methyl beta-D-arabinopyranoside
Formula:	C6 H12 O5
SMILES:	OC1C(O)C(O)COC1OC
InChi:	InChI=1S/C6H12O5/c1-10-6-5(9)4(8)3(7)2-11-6/h3-9H,2H2,1H3/t3-,4-,5+,6-/m1/s1
Synonyms:	methyl beta-D-arabinoside
Definition date:	2005-04-12
Last modified:	2020-07-17
Identifier:	methyl beta-D-arabinopyranoside

RVG

RVG
Name:	6-deoxy-2,3-di-O-methyl-beta-D-glucopyranose
Formula:	C8 H16 O5
SMILES:	OC1C(OC)C(OC)C(OC1C)O
InChi:	InChI=1S/C8H16O5/c1-4-5(9)6(11-2)7(12-3)8(10)13-4/h4-10H,1-3H3/t4-,5-,6+,7-,8-/m1/s1
Definition date:	2020-02-26
Last modified:	2020-07-17
Release date:	2020-07-29
Identifier:	6-deoxy-2,3-di-O-methyl-beta-D-glucopyranose

RVM

RVM
Name:	4,6-dideoxy-2,3-di-O-methyl-alpha-D-xylo-hexopyranose
Formula:	C8 H16 O4
SMILES:	C1C(OC)C(OC)C(OC1C)O
InChi:	InChI=1S/C8H16O4/c1-5-4-6(10-2)7(11-3)8(9)12-5/h5-9H,4H2,1-3H3/t5-,6+,7-,8+/m1/s1
Definition date:	2020-02-26
Last modified:	2020-07-17
Release date:	2020-07-29
Identifier:	4,6-dideoxy-2,3-di-O-methyl-alpha-D-xylo-hexopyranose

V71

V71
Name:	(1R,2R,3S,4R,6S)-4,6-diamino-2,3-dihydroxycyclohexyl 2,6-diamino-2,4,6-trideoxy-4-fluoro-alpha-D-galactopyranoside
Formula:	C12 H25 F N4 O5
SMILES:	C1(C(C(O)C(C(CN)O1)F)N)OC2C(C(O)C(N)CC2N)O
InChi:	InChI=1S/C12H25FN4O5/c13-6-5(2-14)21-12(7(17)9(6)19)22-11-4(16)1-3(15)8(18)10(11)20/h3-12,18-20H,1-2,14-17H2/t3-,4+,5-,6+,7-,8+,9+,10-,11-,12-/m1/s1
Synonyms:	(1R,2R,3S,4R,6S)-4,6-diamino-2,3-dihydroxycyclohexyl 2,6-diamino-2,4,6-trideoxy-4-fluoro-alpha-D-galactoside
Definition date:	2015-06-17
Last modified:	2020-07-17
Release date:	2016-06-22
Identifier:	(1R,2R,3S,4R,6S)-4,6-diamino-2,3-dihydroxycyclohexyl 2,6-diamino-2,4,6-trideoxy-4-fluoro-alpha-D-galactopyranoside

RHA

RHA
Name:	6-deoxy-1-O-phosphono-alpha-L-rhamnopyranose
Formula:	C6 H13 O8 P
SMILES:	O=P(OC1OC(C(O)C(O)C1O)C)(O)O
InChi:	InChI=1S/C6H13O8P/c1-2-3(7)4(8)5(9)6(13-2)14-15(10,11)12/h2-9H,1H3,(H2,10,11,12)/t2-,3-,4+,5+,6-/m0/s1
Synonyms:	6-DEOXY-MANNOSE-1'-PHOSPHATE
Definition date:	1999-07-08
Last modified:	2020-07-17
Identifier:	6-deoxy-1-O-phosphono-alpha-L-mannopyranose

LCN

LCN
Name:	1,5-anhydro-D-arabino-hex-1-enitol
Formula:	C6 H10 O5
SMILES:	OC[CH]1OC=C(O)[CH](O)[CH]1O
InChi:	InChI=1S/C6H10O5/c7-1-4-6(10)5(9)3(8)2-11-4/h2,4-10H,1H2/t4-,5-,6-/m1/s1
Definition date:	2011-05-26
Last modified:	2020-07-17
Identifier:	(2~{R},3~{S},4~{S})-2-(hydroxymethyl)-3,4-dihydro-2~{H}-pyran-3,4,5-triol

RHC

RHC
Name:	(2S)-2-amino-4-[[(2S,3S,4R,5R)-3,4,5-trihydroxyoxolan-2-yl]methylsulfanyl]butanoic acid
Formula:	C9 H17 N O6 S
SMILES:	O=C(O)C(N)CCSCC1OC(O)C(O)C1O
InChi:	InChI=1S/C9H17NO6S/c10-4(8(13)14)1-2-17-3-5-6(11)7(12)9(15)16-5/h4-7,9,11-12,15H,1-3,10H2,(H,13,14)/t4-,5+,6+,7+,9+/m0/s1
Synonyms:	5-(3-AMINO-4,4-DIHYROXY-BUTYLSULFANYLMETHYL)-TETRAHYDRO-FURAN-2,3,4-TRIOL
Definition date:	2001-09-10
Last modified:	2020-07-17
Identifier:	(2S)-2-amino-4-({[(2S,3S,4R,5R)-3,4,5-trihydroxytetrahydrofuran-2-yl]methyl}sulfanyl)butanoic acid (non-preferred name)

ASC

ASC
Name:	ASCORBIC ACID
Formula:	C6 H8 O6
SMILES:	O=C1OC(C(O)=C1O)C(O)CO
InChi:	InChI=1S/C6H8O6/c7-1-2(8)5-3(9)4(10)6(11)12-5/h2,5,7-10H,1H2/t2-,5+/m0/s1
Synonyms:	Vitamin C
Definition date:	1999-07-08
Last modified:	2020-07-17
Identifier:	(5R)-5-[(1S)-1,2-dihydroxyethyl]-3,4-dihydroxyfuran-2(5H)-one (non-preferred name)

A0K

A0K
Name:	1,3-dihydroxypropan-2-yl alpha-D-glucopyranoside
Formula:	C9 H18 O8
SMILES:	OCC(CO)O[CH]1O[CH](CO)[CH](O)[CH](O)[CH]1O
InChi:	InChI=1S/C9H18O8/c10-1-4(2-11)16-9-8(15)7(14)6(13)5(3-12)17-9/h4-15H,1-3H2/t5-,6-,7+,8-,9+/m1/s1
Synonyms:	(2~{S},3~{R},4~{S},5~{S},6~{R})-2-[1,3-bis(oxidanyl)propan-2-yloxy]-6-(hydroxymethyl)oxane-3,4,5-triol
Definition date:	2017-08-08
Last modified:	2020-07-17
Release date:	2018-08-29
Identifier:	(2~{S},3~{R},4~{S},5~{S},6~{R})-2-[1,3-bis(oxidanyl)propan-2-yloxy]-6-(hydroxymethyl)oxane-3,4,5-triol

NSQ

NSQ
Name:	4-nitrophenyl alpha-D-6-sulfoquinovoside
Formula:	C12 H15 N O10 S
SMILES:	O[CH]1[CH](O)[CH](C[S](O)(=O)=O)O[CH](Oc2ccc(cc2)[N+]([O-])=O)[CH]1O
InChi:	InChI=1S/C12H15NO10S/c14-9-8(5-24(19,20)21)23-12(11(16)10(9)15)22-7-3-1-6(2-4-7)13(17)18/h1-4,8-12,14-16H,5H2,(H,19,20,21)/t8-,9-,10+,11-,12+/m1/s1
Synonyms:	4-NITROPHENYL-ALPHA-D-SULFOQUINOVOSIDE
Definition date:	2015-08-28
Last modified:	2020-07-17
Release date:	2016-02-10
Identifier:	[(2S,3S,4S,5R,6R)-6-(4-nitrophenoxy)-3,4,5-tris(oxidanyl)oxan-2-yl]methanesulfonic acid

ASG

ASG
Name:	2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose
Formula:	C8 H15 N O9 S
SMILES:	O=S(=O)(O)OC1C(OC(O)C(NC(=O)C)C1O)CO
InChi:	InChI=1S/C8H15NO9S/c1-3(11)9-5-6(12)7(18-19(14,15)16)4(2-10)17-8(5)13/h4-8,10,12-13H,2H2,1H3,(H,9,11)(H,14,15,16)/t4-,5-,6-,7+,8-/m1/s1
Synonyms:	2-DEOXY-2-ACETAMIDO-BETA-D-GALACTOSE-4-SULFATE
Definition date:	1999-07-08
Last modified:	2020-07-17
Identifier:	2-(acetylamino)-2-deoxy-4-O-sulfo-beta-D-galactopyranose

T68

T68
Name:	N-[(pyridin-2-ylcarbonyl)carbamoyl]-beta-D-glucopyranosylamine
Formula:	C13 H17 N3 O7
SMILES:	O=C(NC1OC(C(O)C(O)C1O)CO)NC(=O)c2ncccc2
InChi:	InChI=1S/C13H17N3O7/c17-5-7-8(18)9(19)10(20)12(23-7)16-13(22)15-11(21)6-3-1-2-4-14-6/h1-4,7-10,12,17-20H,5H2,(H2,15,16,21,22)/t7-,8-,9+,10-,12-/m1/s1
Synonyms:	N-[(pyridin-2-ylcarbonyl)carbamoyl]-beta-D-glucosylamine
Definition date:	2012-11-22
Last modified:	2020-07-17
Release date:	2013-12-11
Identifier:	N-[(pyridin-2-ylcarbonyl)carbamoyl]-beta-D-glucopyranosylamine

ASO

ASO
Name:	1,5-anhydro-D-glucitol
Formula:	C6 H12 O5
SMILES:	OC1C(OCC(O)C1O)CO
InChi:	InChI=1S/C6H12O5/c7-1-4-6(10)5(9)3(8)2-11-4/h3-10H,1-2H2/t3-,4+,5+,6+/m0/s1
Synonyms:	1,5-ANHYDROSORBITOL
Definition date:	1999-07-08
Last modified:	2020-07-17
Identifier:	1,5-anhydro-D-glucitol

RI2

RI2
Name:	1,5-di-O-phosphono-alpha-D-ribofuranose
Formula:	C5 H12 O11 P2
SMILES:	O=P(O)(O)OCC1OC(OP(=O)(O)O)C(O)C1O
InChi:	InChI=1S/C5H12O11P2/c6-3-2(1-14-17(8,9)10)15-5(4(3)7)16-18(11,12)13/h2-7H,1H2,(H2,8,9,10)(H2,11,12,13)/t2-,3-,4-,5-/m1/s1
Synonyms:	1,5-di-O-phosphono-alpha-D-ribose
Definition date:	2011-01-07
Last modified:	2020-07-17
Identifier:	1,5-di-O-phosphono-alpha-D-ribofuranose

RWI

RWI
Name:	(2S)-2-({2-deoxy-2-[(hydroxycarbamoyl)amino]-alpha-D-glucopyranosyl}oxy)butanedioic acid
Formula:	C11 H18 N2 O11
SMILES:	O=C(NC1C(O)C(O)C(CO)OC1OC(C(=O)O)CC(O)=O)NO
InChi:	InChI=1S/C11H18N2O11/c14-2-4-7(17)8(18)6(12-11(21)13-22)10(24-4)23-3(9(19)20)1-5(15)16/h3-4,6-8,10,14,17-18,22H,1-2H2,(H,15,16)(H,19,20)(H2,12,13,21)/t3-,4+,6+,7+,8+,10-/m0/s1
Synonyms:	(2S)-2-({2-deoxy-2-[(hydroxycarbamoyl)amino]-alpha-D-glucosyl}oxy)butanedioic acid
Definition date:	2019-10-09
Last modified:	2020-07-17
Release date:	2020-01-08
Identifier:	(2S)-2-({2-deoxy-2-[(hydroxycarbamoyl)amino]-alpha-D-glucopyranosyl}oxy)butanedioic acid

PH5

PH5
Name:	benzyl 3,5-dideoxy-5-(propanoylamino)-D-glycero-alpha-D-galacto-non-2-ulopyranosidonic acid
Formula:	C19 H27 N O9
SMILES:	O=C(O)C2(OCc1ccccc1)OC(C(O)C(O)CO)C(NC(=O)CC)C(O)C2
InChi:	InChI=1S/C19H27NO9/c1-2-14(24)20-15-12(22)8-19(18(26)27,28-10-11-6-4-3-5-7-11)29-17(15)16(25)13(23)9-21/h3-7,12-13,15-17,21-23,25H,2,8-10H2,1H3,(H,20,24)(H,26,27)/t12-,13+,15+,16+,17+,19+/m0/s1
Synonyms:	2-PHENYL-PROP5AC
Definition date:	2005-06-27
Last modified:	2020-07-17
Identifier:	benzyl 3,5-dideoxy-5-(propanoylamino)-D-glycero-alpha-D-galacto-non-2-ulopyranosidonic acid

T6T

T6T
Name:	alpha-D-tagatopyranose
Formula:	C6 H12 O6
SMILES:	OC1C(OCC(C1O)O)(CO)O
InChi:	InChI=1S/C6H12O6/c7-2-6(11)5(10)4(9)3(8)1-12-6/h3-5,7-11H,1-2H2/t3-,4+,5+,6+/m1/s1
Synonyms:	alpha-D-tagatose
Definition date:	2015-07-13
Last modified:	2020-07-17
Release date:	2015-07-22
Identifier:	alpha-D-tagatopyranose

<9 10 11 12 13 14 151617 18 19 20 21 22 23 24 >

221051

PDB entries from 2024-06-12

PDB statistics

PDBj update info

Contact PDBj

numon