Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PRD_000724
PRD_000724
Name:PYOVERDIN 18-1 Fe Complex
Formula:C57 H84 Fe N17 O24
Description:IN IRON-DEFICIENT CONDITIONS, PSEUDOMONAS AERUGINOSA SECRETES A MAJOR FLUORESCENT SIDEROPHORE NAMED PYOVERDIN (PVD), WHICH AFTER CHELATING IRON(III) IS TRANSPORTED BACK INTO THE CELL VIA ITS OUTER MEMBRANE RECEPTOR FPVA. FPVA IS A TONB-DEPENDENT TRANSPORT PROTEIN AND HAS THE ABILITY TO BIND PVD IN ITS APO- OR IRON-LOADED FORM.
Definition date:2012-12-12
Last modified:2023-09-20
PRD_000725
PRD_000725
Name:PYOVERDIN R Fe Complex
Formula:C48 H64 Fe N15 O21
Description:IN IRON-DEFICIENT CONDITIONS, PSEUDOMONAS AERUGINOSA SECRETES A MAJOR FLUORESCENT SIDEROPHORE NAMED PYOVERDIN (PVD), WHICH AFTER CHELATING IRON(III) IS TRANSPORTED BACK INTO THE CELL VIA ITS OUTER MEMBRANE RECEPTOR FPVA. FPVA IS A TONB-DEPENDENT TRANSPORT PROTEIN AND HAS THE ABILITY TO BIND PVD IN ITS APO- OR IRON-LOADED FORM.
Definition date:2012-12-12
Last modified:2023-09-20
PRD_000726
PRD_000726
Name:PYOVERDIN 13525 Fe Complex
Formula:C49 H71 Fe N14 O19
Description:IN IRON-DEFICIENT CONDITIONS, PSEUDOMONAS AERUGINOSA SECRETES A MAJOR FLUORESCENT SIDEROPHORE NAMED PYOVERDIN (PVD), WHICH AFTER CHELATING IRON(III) IS TRANSPORTED BACK INTO THE CELL VIA ITS OUTER MEMBRANE RECEPTOR FPVA. FPVA IS A TONB-DEPENDENT TRANSPORT PROTEIN AND HAS THE ABILITY TO BIND PVD IN ITS APO- OR IRON-LOADED FORM.
Definition date:2012-12-12
Last modified:2023-09-20
PRD_000728
PRD_000728
Name:Synthetic PYOVERDINE Fe Complex
Formula:C56 H81 Fe N17 O24
Description:IN IRON-DEFICIENT CONDITIONS, PSEUDOMONAS AERUGINOSA SECRETES A MAJOR FLUORESCENT SIDEROPHORE NAMED PYOVERDIN (PVD), WHICH AFTER CHELATING IRON(III) IS TRANSPORTED BACK INTO THE CELL VIA ITS OUTER MEMBRANE RECEPTOR FPVA. FPVA IS A TONB-DEPENDENT TRANSPORT PROTEIN AND HAS THE ABILITY TO BIND PVD IN ITS APO- OR IRON-LOADED FORM.
Definition date:2012-12-12
Last modified:2023-09-20
PRD_000752
PRD_000752
Name:CIRCULIN A
Formula:C134 H211 N38 O38 S6
Definition date:2020-08-12
Last modified:2023-09-20
PRD_000758
PRD_000758
Name:THIOPEPTIDE THIOSTREPTON REDUCED AT N-CA BOND OF RESIDUE 14
Formula:C72 H86 N19 O18 S5
Description:THIOSTREPTON IS A HETEROCYCLIC THIOPEPTIDE, CONSISTING OF FOUR THIAZOLES, ONE THIOZOLINE, ONE PIPERIDEINE RINGS. A MODIFIED QUINOLINE, RESIDUE 0, IS LINKED TO MAIN-CHAIN RESIDUE 1 AND SIDE-CHAIN OF RESIDUE 12. IN THIS ENTRY RESIDUE 14 WAS CHEMICALLY MODIFIED TO HAVE A SINGLE BOND N-CA.
Definition date:2012-12-12
Last modified:2023-09-20
PRD_000759
PRD_000759
Name:THIOPEPTIDE THIOSTREPTON WITH EPIMER FORM OF RESIDUE 9
Formula:C69 H81 N18 O17 S5
Description:THIOSTREPTON IS A HETEROCYCLIC THIOPEPTIDE, CONSISTING OF FOUR THIAZOLES ONE THIOZOLINE ONE PIPERIDEINE RINGS. A MODIFIED QUINOLINE, RESIDUE 0, IS LINKED TO MAIN-CHAIN RESIDUE 1 AND SIDE-CHAIN OF RESIDUE 12. IN THIS ENTRY RESIDUE 9 WAS CHEMICALLY MODIFIED FROM D-CYS TO L-CYS AND RESIDUE 17 (HET DHA) WAS DELETED.
Definition date:2012-12-12
Last modified:2023-09-20
PRD_000760
PRD_000760
Name:THIOPEPTIDE THIOSTREPTON OXIDIZED AT CA-CB BOND OF RESIDUE 9
Formula:C69 H79 N18 O17 S5
Description:THIOSTREPTON IS A HETEROCYCLIC THIOPEPTIDE, CONSISTING OF FOUR THIAZOLES ONE THIOZOLINE ONE PIPERIDEINE RINGS. A MODIFIED QUINOLINE LINKED TO MAIN-CHAIN RESIDUE 1 AND SIDE-CHAIN OF RESIDUE 12. IN THIS ENTRY RESIDUE 9 WAS CHEMICALLY MODIFIED: THE CA-CB BOND WAS OXIDIZED FROM SINGLE TO DOUBLE. RESIDUE 17 (HET DHA) WAS DELETED.
Definition date:2012-12-12
Last modified:2023-09-20
PRD_000764
PRD_000764
Name:CYCLOSPORIN D, 5,7 mutation
Formula:C64 H117 N11 O12 S
Description:CYCLOSPORIN IS A CYCLIC UNDECAPEPTIDE. CYCLIZATION IS ACHIEVED BY LINKING THE N- AND THE C- TERMINI. CYCLOSPORIN D IS A NATURAL ANALOG OF CYCLOSPORIN A, OBTAINED IN DIFFERENT NUTRIENT BROTH AND DIFFERS FROM CYCLOSPORIN IN RESIDUE 6 (ABA6VAL). THE CYCLOSPORIN D MOLECULE WAS MODIFIED AT POSITIONS 5 AND 7 TO BE (6,7-DIHYDRO)4-[(E)-BUTENYL]-4,N-DIMETHYL-THREONINE AND (2-S-METHYL)-SARCOSINE, RESPECTIVELY.
Definition date:2012-12-12
Last modified:2023-09-20
PRD_000765
PRD_000765
Name:CYCLOSPORIN A, 5 mutation
Formula:C63 H113 N11 O12
Description:CYCLOSPORIN IS A CYCLIC UNDECAPEPTIDE. CYCLIZATION IS ACHIEVED BY LINKING THE N- AND THE C- TERMINI. THE CYCLOSPORIN WAS MODIFIED AT POSITION 5 TO BE 4-[(E)-2-BUTENYL]-4,4,N-TRIMETHYL-L-THREONINE
Definition date:2012-12-12
Last modified:2023-09-20
PRD_000766
PRD_000766
Name:CYCLOSPORIN A, 6 mutation
Formula:C63 H113 N11 O13
Description:CYCLOSPORIN IS A CYCLIC UNDECAPEPTIDE. CYCLIZATION IS ACHIEVED BY LINKING THE N- AND THE C- TERMINI. THE CYCLOSPORIN A MOLECULE WAS MODIFIED AT POSITION 6 TO BE 2-AMINO-5-HYDROXYPENTANOIC ACID
Definition date:2012-12-12
Last modified:2023-09-20
PRD_000767
PRD_000767
Name:CYCLOSPORIN A, 7 mutation
Formula:C63 H113 N11 O13
Description:CYCLOSPORIN IS A CYCLIC UNDECAPEPTIDE. CYCLIZATION IS ACHIEVED BY LINKING THE N- AND THE C- TERMINI. THE CYCLOSPORIN A WAS MODIFIED AT POSITION 7 TO BE N-METHYL-D-SERINE
Definition date:2012-12-12
Last modified:2023-09-20
PRD_000768
PRD_000768
Name:CYCLOSPORIN A, 8 mutation
Formula:C62 H111 N11 O12
Description:CYCLOSPORIN IS A CYCLIC UNDECAPEPTIDE. CYCLIZATION IS ACHIEVED BY LINKING THE N- AND THE C- TERMINI. THE CYCLOSPORIN A MOLECULE WAS MODIFIED AT POSITION 8 TO BE N-METHYL-ISOLEUCINE
Definition date:2012-12-12
Last modified:2023-09-20
PRD_002426
PRD_002426
Name:Corramycin
Formula:C51 H81 N11 O21
Definition date:2023-08-16
Last modified:2023-08-16
PRD_002431
PRD_002431
Name:Cyclic tetraadenosine monophosphate (cA4)
Formula:C40 H48 N20 O24 P4
Description:Cyclic oligoadenylates such as c-tetraAMP were found to be novel bacterial second messengers. Antiviral in context of signalling for Type III CRISPR-Cas systems.
Definition date:2023-07-12
Last modified:2023-07-03
PRD_002346
PRD_002346
Name:Inhibitor ARC-3126
Formula:C58 H108 Br N31 O9 S
Definition date:2021-08-04
Last modified:2023-06-11
PRD_002515
PRD_002515
Name:all-D Helicon Polypeptide FP40918
Formula:C84 H115 N22 O26 S2
Definition date:2023-02-15
Last modified:2023-02-15
PRD_002324
PRD_002324
Name: [D-(CHOLINYLESTER)SER8]-CYCLOSPORIN
Formula:C62 H111 N11 O13
Definition date:2018-09-12
Last modified:2018-09-12
PRD_001132
PRD_001132
Name:CYCLOSPORIN D
Formula:C63 H113 N11 O12
Description:CYCLOSPORIN IS A CYCLIC UNDECAPEPTIDE. CYCLIZATION IS ACHIEVED BY LINKING THE N- AND THE C- TERMINI. CYCLOSPORIN D IS A NATURAL ANALOG OF CYCLOSPORIN A OBTAINED FROM A DIFFERENT NUTRIENT BROTH AND DIFFERS FROM CYCLOSPORIN IN RESIDUE 6 (ABA6VAL)
Definition date:2013-07-02
Last modified:2017-05-04
PRD_002186
PRD_002186
Name:6-ammonio-N-[3-(9H-fluoren-9-yl)propanoyl]-L-norleucyl-6-ammonio-L-norleucyl-L-alpha-glutamyl-L-threonyl-L-alpha-glutamyl-L-valine
Formula:C47 H70 N8 O13
Definition date:2016-08-17
Last modified:2016-08-17
PRD_002101
PRD_002101
Name:N-[(6R,9S,10R,13S,15aR,22S,24aR)-22-[4-(dimethylamino)benzyl]-6-ethyl-10,23-dimethyl-18-(morpholin-4-ylmethyl)-5,8,12,15,21,24-hexaoxo-13-phenyl-1,2,3,5,6,7,8,9,10,13,14,15,15a,16,19,21,22,23,24,24a-icosahydro-12H-pyrido[2,1-f]pyrrolo[2,1-l][1,4,7,10,13,16]oxapentaazacyclononadecin-9-yl]-3-hydroxypyridine-2-carboxamide
Formula:C50 H63 N9 O10
Definition date:2014-07-30
Last modified:2014-07-30
PRD_001162
PRD_001162
Name:Salinamide A
Formula:C51 H69 N7 O15
Description:bicyclic depsipeptide salinamide A is a potent anti-inflammatory agent found in the marine bacterium Streptomyces sp. CNB-091. The suggested biosynthesis pathway indicates the peptide core of 1 is probably derived from the hexapeptide Thr-D-Ile-Hpg-MePhe-D-aThr-Ser (Tetrahedron Letters 39 (1998) 3915-3918).
Definition date:2014-05-21
Last modified:2014-05-21
PRD_001130
PRD_001130
Name:SmBz, cyclosporin A derivative
Formula:C70 H118 N11 O14
Definition date:2013-11-06
Last modified:2013-11-06
PRD_001070
PRD_001070
Name:bacitracin A2
Formula:C66 H106 N17 O16 S
Definition date:2013-08-14
Last modified:2013-08-14
PRD_001122
PRD_001122
Name:CYCLOSPORIN D
Formula:C64 H115 N11 O12
Description:CYCLOSPORIN IS A CYCLIC UNDECAPEPTIDE. CYCLIZATION IS ACHIEVED BY LINKING THE N- AND THE C- TERMINI. CYCLOSPORIN D IS A NATURAL ANALOG OF CYCLOSPORIN A, OBTAINED FROM A DIFFERENT NUTRIENT BROTH AND DIFFERS FROM CYCLOSPORIN IN RESIDUE 6 (ABA6VAL). THE CYCLOSPORIN MOLECULE WAS MODIFIED AT POSITION 7 TO BE N-METHYL-L-ALANINE.
Definition date:2013-06-20
Last modified:2013-06-20

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon