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9GWZ

Crystal structure of 23ME-00610 Fab

This is a non-PDB format compatible entry.
Summary for 9GWZ
Entry DOI10.2210/pdb9gwz/pdb
Related9GWT
Descriptor23ME-00610 Fab (heavy), 23ME-00610 Fab (light), CHLORIDE ION, ... (6 entities in total)
Functional Keywords23me-00610, human cd200r1, immune checkpoint inhibitor, immuno-oncology, antitumor protein
Biological sourceHomo sapiens
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Total number of polymer chains8
Total formula weight196642.26
Authors
Huang, Y.M.,Ganichkin, O.M. (deposition date: 2024-09-27, release date: 2024-10-23)
Primary citationMelero, C.,Budiardjo, S.J.,Daruwalla, A.,Larrabee, L.,Ganichkin, O.,Heiler, A.J.,Fenaux, J.,Chung, B.,Fuh, G.,Huang, Y.M.
CD200R1 immune checkpoint blockade by the first-in-human anti-CD200R1 antibody 23ME-00610: molecular mechanism and engineering of a surrogate antibody.
Mabs, 16:2410316-2410316, 2024
Cited by
PubMed Abstract: Human CD200R1 (hCD200R1), an immune inhibitory receptor expressed predominantly on T cells and myeloid cells, was identified as a promising immuno-oncology target by the 23andMe database. Blockade of CD200R1-dependent signaling enhances T cell-mediated antitumor activity in vitro and in vivo. 23ME-00610 is a potential first-in-class, humanized IgG1 investigational antibody that binds hCD200R1 with high affinity. We have previously shown that 23ME-00610 inhibits the hCD200R1 immune checkpoint function. Herein, we dissect the molecular mechanism of 23ME-00610 blockade of hCD200R1 by solving the crystal structure of 23ME-00610 Fab in complex with hCD200R1 and performing mutational studies, which show 23ME-00610 blocks the interaction between hCD200 and hCD200R1 through steric hindrance. However, 23ME-00610 does not bind CD200R1 of preclinical species such as cynomolgus monkey MfCD200R1. To enable preclinical toxicology studies of CD200R1 blockade in a pharmacologically relevant non-clinical species, we engineered a surrogate antibody with high affinity toward MfCD200R1. We used phage display libraries of 23ME-00610 variants with individual CDR residues randomized to all 20 amino acids, from which we identified mutations that switched on MfCD200R1 binding. Structural analysis suggests how the surrogate, named 23ME-00611, acquires the ortholog binding ability at the equivalent epitope of 23ME-00610. This engineering approach does not require knowledge of structural and functional mapping of antibody-antigen interaction and thus is generally applicable for therapeutic antibody development when desired ortholog binding is lacking. These findings provide foundational insights as 23ME-00610 advances in clinical studies to gain understanding of the hCD200R1 immune checkpoint as a target in immuno-oncology.
PubMed: 39402718
DOI: 10.1080/19420862.2024.2410316
PDB entries with the same primary citation
Experimental method
X-RAY DIFFRACTION (2.12 Å)
Structure validation

237735

数据于2025-06-18公开中

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