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8YR5

Crystal structure of E. coli phosphatidylserine synthase in apo state

Summary for 8YR5
Entry DOI10.2210/pdb8yr5/pdb
Related8YR6
DescriptorCDP-diacylglycerol--serine O-phosphatidyltransferase, SULFATE ION (2 entities in total)
Functional Keywordsapo, phospholipid metabolism, peripheral membrane protein, phosphatidylserine, membrane protein, transferase
Biological sourceEscherichia coli str. K-12 substr. MG1655
Total number of polymer chains12
Total formula weight650291.69
Authors
Kim, J.,Lee, E.,Cho, G. (deposition date: 2024-03-20, release date: 2024-11-20, Last modification date: 2025-01-15)
Primary citationLee, E.,Cho, G.,Kim, J.
Structural basis for membrane association and catalysis by phosphatidylserine synthase in Escherichia coli.
Sci Adv, 10:eadq4624-eadq4624, 2024
Cited by
PubMed Abstract: Phosphatidylserine synthase (PssA) is essential in the biosynthesis of phosphatidylethanolamine, a major phospholipid of bacterial membranes. A peripheral membrane protein PssA can associate with the cellular membrane in its active state or exist in the cytosol in an inactive form. The membrane-bound enzyme acts on cytidine diphosphate diacylglycerol (CDP-DG) to form cytidine monophosphate and a covalent intermediate, which is subsequently targeted by serine to produce phosphatidylserine. Here, we present two crystal structures of PssA, one complexed with CDP-DG and the other without. The lipid-bound structure mimics the Michaelis complex before the formation of a covalent intermediate, revealing key determinants for substrate recognition and catalysis. Notably, membrane-free PssA is in a monomer-dimer equilibrium, with only the monomer capable of associating with the membrane, suggesting a regulatory mechanism for phospholipid biosynthesis dependent on the oligomerization state of the enzyme.
PubMed: 39693441
DOI: 10.1126/sciadv.adq4624
PDB entries with the same primary citation
Experimental method
X-RAY DIFFRACTION (2.83 Å)
Structure validation

246031

数据于2025-12-10公开中

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