8Y5J

Cryo-EM structure of SARS-CoV-2 Omicron JN.1 spike protein

Summary for 8Y5J

• Entry DOI: 10.2210/pdb8y5j/pdb
• EMDB information: 38937
• Descriptor: Spike glycoprotein, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... (4 entities in total)
• Functional Keywords: sars-cov-2, omicron, jn.1, spike protein, viral protein
• Biological source: Severe acute respiratory syndrome coronavirus 2
• Total number of polymer chains: 3
• Total formula weight: 423702.53

Authors

Li, L.J.,Gu, Y.H.,Qi, J.X.,Gao, G.F. (deposition date: 2024-01-31, release date: 2024-07-03, Last modification date: 2024-08-21)

• Primary citation: Li, L.,Shi, K.,Gu, Y.,Xu, Z.,Shu, C.,Li, D.,Sun, J.,Cong, M.,Li, X.,Zhao, X.,Yu, G.,Hu, S.,Tan, H.,Qi, J.,Ma, X.,Liu, K.,Gao, G.F.; Spike structures, receptor binding, and immune escape of recently circulating SARS-CoV-2 Omicron BA.2.86, JN.1, EG.5, EG.5.1, and HV.1 sub-variants.; Structure, 32:1055-1067.e6, 2024; PubMed: 39013463; DOI: 10.1016/j.str.2024.06.012

Experimental method

ELECTRON MICROSCOPY (2.94 Å)