8SY1

RNA duplex bound with imidazolium bridged GA dinucleotide

Summary for 8SY1

• Entry DOI: 10.2210/pdb8sy1/pdb
• Descriptor: RNA (5'-R(*(TLN)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G*(GMA))-3'), [(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-[2-azanyl-3-[[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]imidazol-1-yl]phosphinic acid (3 entities in total)
• Functional Keywords: rna, imidazolium bridged ga dinucleotide
• Biological source: synthetic construct
• Total number of polymer chains: 4
• Total formula weight: 21089.20

Authors

Zhang, W.,Dantsu, Y. (deposition date: 2023-05-24, release date: 2023-05-31, Last modification date: 2023-12-13)

• Primary citation: Dantsu, Y.,Zhang, Y.,Zhang, W.; Insight into the structures of unusual base pairs in RNA complexes containing a primer/template/adenosine ligand.; Rsc Chem Biol, 4:942-951, 2023; PubMed: 37920395; DOI: 10.1039/d3cb00137g

Experimental method

X-RAY DIFFRACTION (1.76 Å)