8E3L
E. coli 50S ribosome bound to D-linker solithromycin conjugate
This is a non-PDB format compatible entry.
Summary for 8E3L
Entry DOI | 10.2210/pdb8e3l/pdb |
EMDB information | 27867 |
Descriptor | 50S ribosomal RNA, 50S ribosomal protein L34, (2~{R})-~{N}-[(2~{R})-6-azanyl-1-[[(2~{R})-1-[[(2~{R})-1-[[3-[1-[4-[(1~{S},2~{R},5~{S},7~{R},8~{R},9~{R},11~{R},13~{R},14~{R})-8-[(2~{S},3~{R},4~{S},6~{R})-4-(dimethylamino)-6-methyl-3-oxidanyl-oxan-2-yl]oxy-2-ethyl-5-fluoranyl-9-methoxy-1,5,7,11,13-pentamethyl-4,6,12,16-tetrakis(oxidanylidene)-3,17-dioxa-15-azabicyclo[12.3.0]heptadecan-15-yl]butyl]-1,2,3-triazol-4-yl]phenyl]amino]-4-methylsulfanyl-1-oxidanylidene-butan-2-yl]amino]-3-(4-hydroxyphenyl)-1-oxidanylidene-propan-2-yl]amino]-1-oxidanylidene-hexan-2-yl]-1-[(2~{R})-2-[[(2~{R})-2-[2-[[2,3-bis(oxidanyl)phenyl]carbonyl-[4-[[2,3-bis(oxidanyl)phenyl]carbonylamino]butyl]amino]ethanoylamino]-3-(1~{H}-indol-3-yl)propanoyl]amino]-3-oxidanyl-propanoyl]pyrrolidine-2-carboxamide, ... (11 entities in total) |
Functional Keywords | e. coli ribosome, solithromycin, siderophore conjugate, antibiotics, ribosome |
Biological source | Escherichia coli More |
Total number of polymer chains | 10 |
Total formula weight | 1111102.12 |
Authors | Pellegrino, J.,Lee, D.J.,Fraser, J.S.,Seiple, I.B. (deposition date: 2022-08-17, release date: 2023-06-28) |
Primary citation | Boyce, J.H.,Pellegrino, J.,Lee, D.J.,Ecker, A.K.,Seiple, I.B.,Fraser, J.S. Solithromycin siderophore conjugates To Be Published, |
Experimental method | ELECTRON MICROSCOPY (2.35 Å) |
Structure validation
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