8BOY

X-ray structure of the adduct formed upon reaction of the five-coordinate Pt(II) complex, 1-Me,Me, with HEWL at pH 4.0

これはPDB形式変換不可エントリーです。

8BOY の概要

• エントリーDOI: 10.2210/pdb8boy/pdb
• 分子名称: Lysozyme C, NITRATE ION, 1-[1,3-dimethyl-4-(1~{H}-1,2,3-triazol-5-yl)imidazol-1-ium-2-yl]-1,2',11'-trimethyl-spiro[1$l^{6}-platinacycloprop-2-ene-1,15'-1,12-diaza-15$l^{6}-platinatetracyclo[10.2.1.0^{5,14}.0^{8,13}]pentadeca-2,4,6,8,10,13-hexaene], ... (5 entities in total)
• 機能のキーワード: platinum, five-coordinate, glucoconjugate, metallodrug, protein interaction, hydrolase
• 由来する生物種: Gallus gallus (chicken)
• タンパク質・核酸の鎖数: 1
• 化学式量合計: 15753.88

構造登録者

Ferraro, G.,Tito, G.,Merlino, A. (登録日: 2022-11-15, 公開日: 2023-02-22, 最終更新日: 2024-02-07)

主引用文献

Annunziata, A.,Imbimbo, P.,Cucciolito, M.E.,Ferraro, G.,Langellotti, V.,Marano, A.,Melchiorre, M.,Tito, G.,Trifuoggi, M.,Monti, D.M.,Merlino, A.,Ruffo, F.
Impact of Hydrophobic Chains in Five-Coordinate Glucoconjugate Pt(II) Anticancer Agents.
Int J Mol Sci, 24:-, 2023

PubMed Abstract: This study describes new platinum(II) cationic five-coordinate complexes () of the formula [PtR(NHC)(dmphen)(ethene)]CFSO (dmphen = 2,9-dimethyl-1,10-phenanthroline), containing in their axial positions an alkyl group R (methyl or octyl) and an imidazole-based NHC-carbene ligand with a substituent R' of variable length (methyl or octyl) on one nitrogen atom. The Pt-carbene bond is stable both in DMSO and in aqueous solvents. In DMSO, a gradual substitution of dmphen and ethene is observed, with the formation of a square planar solvated species. Octanol/water partitioning studies have revealed the order of hydrophobicity of the complexes ( > > > ). Their biological activity was investigated against two pairs of cancer and non-cancer cell lines. The tested drugs were internalized in cancer cells and able to activate the apoptotic pathway. The reactivity of with DNA and protein model systems was also studied using UV-vis absorption spectroscopy, fluorescence, and X-ray crystallography. The compound binds DNA and interacts in various ways with the model protein lysozyme. Remarkably, structural data revealed that the complex can bind lysozyme via non-covalent interactions, retaining its five-coordinate geometry.

PubMed: 36768690
DOI: 10.3390/ijms24032369

実験手法

X-RAY DIFFRACTION (1.33 Å)