6Y1G

Photoconverted HcRed in its optoacoustic state

Summary for 6Y1G

• Entry DOI: 10.2210/pdb6y1g/pdb
• Descriptor: GFP-like non-fluorescent chromoprotein, 1,2-ETHANEDIOL (3 entities in total)
• Functional Keywords: reversible switchable fluorescent protein, fluorescent protein
• Biological source: Heteractis crispa (Leathery sea anemone)
• Total number of polymer chains: 4
• Total formula weight: 108917.28

Authors

Janowski, R.,Fuenzalida-Werner, J.P.,Mishra, K.,Stiel, A.C.,Niessing, D. (deposition date: 2020-02-12, release date: 2020-07-29, Last modification date: 2024-10-16)

Primary citation

Fuenzalida Werner, J.P.,Huang, Y.,Mishra, K.,Janowski, R.,Vetschera, P.,Heichler, C.,Chmyrov, A.,Neufert, C.,Niessing, D.,Ntziachristos, V.,Stiel, A.C.
Challenging a Preconception: Optoacoustic Spectrum Differs from the Optical Absorption Spectrum of Proteins and Dyes for Molecular Imaging.
Anal.Chem., 92:10717-10724, 2020

PubMed Abstract: Optoacoustic (photoacoustic) imaging has seen marked advances in detection and data analysis, but there is less progress in understanding the photophysics of common optoacoustic contrast agents. This gap blocks the development of novel agents and the accurate analysis and interpretation of multispectral optoacoustic images. To close it, we developed a multimodal laser spectrometer (MLS) to enable the simultaneous measurement of optoacoustic, absorbance, and fluorescence spectra. Herein, we employ MLS to analyze contrast agents (methylene blue, rhodamine 800, Alexa Fluor 750, IRDye 800CW, and indocyanine green) and proteins (sfGFP, mCherry, mKate, HcRed, iRFP720, and smURFP). We found that the optical absorption spectrum does not correlate with the optoacoustic spectrum for the majority of the analytes. We determined that for dyes, the transition underlying an aggregation state has more optoacoustic signal generation efficiency than the monomer transition. For proteins we found a favored optoacoustic relaxation that stems from the neutral or zwitterionic chromophores and unreported photoswitching behavior of tdTomato and HcRed. We then crystalized HcRed in its photoswitch optoacoustic state, confirming structurally the change in isomerization with respect to HcReds' fluorescence state. Finally, on the example of the widely used label tdTomato and the dye indocyanine green, we show the importance of correct photophysical (e.g., spectral and kinetic) information as a prerequisite for spectral-unmixing for in vivo imaging.

PubMed: 32640156
DOI: 10.1021/acs.analchem.0c01902

Experimental method

X-RAY DIFFRACTION (2.3 Å)