6T8K
Crystal structure of Bacteroides thetaiotamicron EndoBT-3987 in complex with Man9GlcNAc product in P1
Summary for 6T8K
Entry DOI | 10.2210/pdb6t8k/pdb |
Descriptor | Endo-beta-N-acetylglucosaminidase F1, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... (4 entities in total) |
Functional Keywords | endo-b-n-acetylglucosaminidase, endobt, glycoside hydrolase, hydrolase |
Biological source | Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) |
Total number of polymer chains | 2 |
Total formula weight | 101828.60 |
Authors | Trastoy, B.,Du, J.J.,Klontz, E.H.,Cifuente, J.O.,Sundberg, E.J.,Guerin, M.E. (deposition date: 2019-10-24, release date: 2020-02-26, Last modification date: 2024-01-24) |
Primary citation | Trastoy, B.,Du, J.J.,Klontz, E.H.,Li, C.,Cifuente, J.O.,Wang, L.X.,Sundberg, E.J.,Guerin, M.E. Structural basis of mammalian high-mannose N-glycan processing by human gut Bacteroides. Nat Commun, 11:899-899, 2020 Cited by PubMed: 32060313DOI: 10.1038/s41467-020-14754-7 PDB entries with the same primary citation |
Experimental method | X-RAY DIFFRACTION (2 Å) |
Structure validation
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