6T1D

Pleurotus Ostreatus Lectin (POL), compelx with melibiose

6T1D の概要

• エントリーDOI: 10.2210/pdb6t1d/pdb
• 関連するPDBエントリー: 6T0Q
• 関連するBIRD辞書のPRD_ID: PRD_900037
• 分子名称: Lectin, alpha-D-galactopyranose-(1-6)-alpha-D-glucopyranose, CALCIUM ION, ... (4 entities in total)
• 機能のキーワード: lectin, pol, galactose, carbohydrate-binding module (cbm), sugar binding protein
• 由来する生物種: Pleurotus ostreatus (Oyster mushroom)
• タンパク質・核酸の鎖数: 6
• 化学式量合計: 228927.75

構造登録者

Destefanis, L.,Perduca, M.,Bovi, M.,Monaco, H.L.,Capaldi, S. (登録日: 2019-10-04, 公開日: 2020-02-19, 最終更新日: 2024-10-23)

主引用文献

Perduca, M.,Destefanis, L.,Bovi, M.,Galliano, M.,Munari, F.,Assfalg, M.,Ferrari, F.,Monaco, H.L.,Capaldi, S.
Structure and properties of the oyster mushroom (Pleurotus ostreatus) lectin.
Glycobiology, 30:550-562, 2020

PubMed Abstract: Pleurotus ostreatus Lectin (POL) is a 353 amino acid chain lectin that can be purified from the fruiting bodies of the very well-known and widely diffused edible oyster mushrooms (P. ostreatus). The lectin has been partially characterized by different groups and, although it was crystallized about 20 years ago, its 3D structure and the details of its interactions with carbohydrates are still unknown. This paper reports the 3D structure and ligand-binding properties of POL. We have determined the X-ray structure of the apo-protein purified from the fruiting bodies of the mushroom and that of the recombinant protein in complex with melibiose to a resolution of about 2 Å. The lectin is a homodimer in which the two polypeptide chains are linked by a disulfide bridge. A POL monomer is composed of two highly homologous β-jellyroll domains each of which containing a calcium-dependent carbohydrate-binding site. A high degree of sequence similarity is observed between the two carbohydrate-binding modules present in each monomer. The structure of the lectin in complex with melibiose reveals that a POL dimer has four calcium-dependent carbohydrate-binding sites. The interaction with sugars in solution has been characterized by isothermal titration calorimetry and saturation transfer difference NMR and it sheds new light on the molecular determinants of POL specificity. The lectin exhibits in vitro antiproliferative effects against human cancer cell lines and presents structural similarity with the prototype member of the CBM67 family, the noncatalytic domain of Streptomyces avermitilis α-rhamnosidase.

PubMed: 31985778
DOI: 10.1093/glycob/cwaa006

実験手法

X-RAY DIFFRACTION (2.2 Å)