6S5Y

Structure of tandemly arrayed consecutive Rib domains (Rib2R) from Group B Streptococcal species Streptococcus agalactiae

6S5Y の概要

• エントリーDOI: 10.2210/pdb6s5y/pdb
• 分子名称: Group B streptococcal R4 surface protein (2 entities in total)
• 機能のキーワード: rib domain, bacterial cell surface, immunoglobulin fold, profile-hmm, domain atrophy, structural protein
• 由来する生物種: Streptococcus agalactiae
• タンパク質・核酸の鎖数: 8
• 化学式量合計: 135035.64

構造登録者

Whelan, F.,Griffiths, S.C.,Bateman, A.,Potts, J.R. (登録日: 2019-07-02, 公開日: 2019-12-11, 最終更新日: 2024-06-19)

主引用文献

Whelan, F.,Lafita, A.,Griffiths, S.C.,Cooper, R.E.M.,Whittingham, J.L.,Turkenburg, J.P.,Manfield, I.W.,St John, A.N.,Paci, E.,Bateman, A.,Potts, J.R.
Defining the remarkable structural malleability of a bacterial surface protein Rib domain implicated in infection.
Proc.Natl.Acad.Sci.USA, 116:26540-26548, 2019

PubMed Abstract: groups A and B cause serious infections, including early onset sepsis and meningitis in newborns. Rib domain-containing surface proteins are found associated with invasive strains and elicit protective immunity in animal models. Yet, despite their apparent importance in infection, the structure of the Rib domain was previously unknown. Structures of single Rib domains of differing length reveal a rare case of domain atrophy through deletion of 2 core antiparallel strands, resulting in the loss of an entire sheet of the β-sandwich from an immunoglobulin-like fold. Previously, observed variation in the number of Rib domains within these bacterial cell wall-attached proteins has been suggested as a mechanism of immune evasion. Here, the structure of tandem domains, combined with molecular dynamics simulations and small angle X-ray scattering, suggests that variability in Rib domain number would result in differential projection of an N-terminal host-colonization domain from the bacterial surface. The identification of 2 further structures where the typical B-D-E immunoglobulin β-sheet is replaced with an α-helix further confirms the extensive structural malleability of the Rib domain.

PubMed: 31818940
DOI: 10.1073/pnas.1911776116

実験手法

X-RAY DIFFRACTION (2.3 Å)