Crystal structure of VP5 from Haloarchaeal pleomorphic virus 2

Summary for 6QGI

DescriptorVP5, N-ACETYL-D-GLUCOSAMINE, CHLORIDE ION, ... (4 entities in total)
Functional Keywordsprokaryotic, viral, membrane fusion, viral protein
Biological sourceHalorubrum pleomorphic virus 2
Total number of polymer chains1
Total molecular weight56878.13
El Omari, K.,Walter, T.S.,Harlos, K.,Grimes, J.M.,Stuart, D.I.,Roine, E. (deposition date: 2019-01-11, release date: 2019-02-27)
Primary citation
El Omari, K.,Li, S.,Kotecha, A.,Walter, T.S.,Bignon, E.A.,Harlos, K.,Somerharju, P.,De Haas, F.,Clare, D.K.,Molin, M.,Hurtado, F.,Li, M.,Grimes, J.M.,Bamford, D.H.,Tischler, N.D.,Huiskonen, J.T.,Stuart, D.I.,Roine, E.
The structure of a prokaryotic viral envelope protein expands the landscape of membrane fusion proteins.
Nat Commun, 10:846-846, 2019
PubMed: 30783086 (PDB entries with the same primary citation)
DOI: 10.1038/s41467-019-08728-7
MImport into Mendeley
Experimental method

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.24860 0.5% 3.8%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 6qgi
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Molmil generated image of 6qgi
rotated about x axis by 90°
Molmil generated image of 6qgi
rotated about y axis by 90°