6JKW

Seleno-methionine PNGM-1 from deep-sea sediment metagenome

Summary for 6JKW

DescriptorMetallo-beta-lactamases PNGM-1, ZINC ION (3 entities in total)
Functional Keywordsmbls, zinc binding motif, antibiotic resistance, metagenome, structural genomics, psi-biology, transferase
Biological sourceAcinetobacter baumannii
Total number of polymer chains8
Total molecular weight341036.36
Authors
Hong, M.K.,Park, K.S.,Jeon, J.H.,Lee, J.H.,Park, Y.S.,Lee, S.H.,Kang, L.W. (deposition date: 2019-03-02, release date: 2019-04-17)
Primary citation
Kang, L.W.,Lee, S.H.
PNGM 1 a novel subclass B3 metallo beta lactamase from a deep sea sediment metagenome
Journal of Global Antimicrobial Resistance, 14:302-305, 2018
PubMed: 29842976 (PDB entries with the same primary citation)
DOI: 10.1016/j.jgar.2018.05.021.
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.29 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.2795 1.0% 5.0% 7.2%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

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More Biological unit images

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Molmil generated image of 6jkw
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(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (6jkw.pdb2.gz [246.44 KB])
Coordinate files for Biological unit (6jkw.pdb1.gz [246.99 KB])