6INT

xylose isomerase from Paenibacillus sp. R4

Summary for 6INT

DescriptorXylose isomerase, CALCIUM ION (3 entities in total)
Functional Keywordspaenibacillus species, cold-active protein, isomerase
Biological sourcePaenibacillus sp. R4
Total number of polymer chains8
Total molecular weight392464.15
Authors
Lee, J.H.,Lee, C.W.,Park, S. (deposition date: 2018-10-26, release date: 2019-01-16)
Primary citation
Park, S.H.,Kwon, S.,Lee, C.W.,Kim, C.M.,Jeong, C.S.,Kim, K.J.,Hong, J.W.,Kim, H.J.,Park, H.H.,Lee, J.H.
Crystal structure and functional characterization of a xylose isomerase (PbXI) from the psychrophilic soil microorganism,Paenibacillussp
J. Microbiol. Biotechnol., 2018
PubMed: 30602271 (PDB entries with the same primary citation)
DOI: 10.4014/jmb.1810.10057
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.942 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.2493 0.4% 0.9% 3.9%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 6int
no rotation
Molmil generated image of 6int
rotated about x axis by 90°
Molmil generated image of 6int
rotated about y axis by 90°

More Biological unit images

Molmil generated image of 6int
no rotation
Molmil generated image of 6int
rotated about x axis by 90°
Molmil generated image of 6int
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (6int.pdb1.gz [288.41 KB])
Coordinate files for Biological unit (6int.pdb2.gz [289.3 KB])
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