6IDV

Peptide Asparaginyl Ligases from Viola yedoensis

Summary for 6IDV

DescriptorPeptide Asparaginyl Ligases, N-ACETYL-D-GLUCOSAMINE, ALPHA-L-FUCOSE, ... (7 entities in total)
Functional Keywordspeptide ligase, pal, aep, ligase
Biological sourceViola philippica
Total number of polymer chains2
Total molecular weight108887.17
Authors
El Sahili, A.,Hu, S.,Lescar, J. (deposition date: 2018-09-11, release date: 2019-05-15, Last modification date: 2019-11-27)
Primary citation
Hemu, X.,El Sahili, A.,Hu, S.,Wong, K.,Chen, Y.,Wong, Y.H.,Zhang, X.,Serra, A.,Goh, B.C.,Darwis, D.A.,Chen, M.W.,Sze, S.K.,Liu, C.F.,Lescar, J.,Tam, J.P.
Structural determinants for peptide-bond formation by asparaginyl ligases.
Proc.Natl.Acad.Sci.USA, 116:11737-11746, 2019
PubMed: 31123145 (PDB entries with the same primary citation)
DOI: 10.1073/pnas.1818568116
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.4 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.2414 0.6% 6.2% 2.9%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
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