6IBC

Thermophage P23-45 procapsid

Summary for 6IBC

Related6I9E
EMDB information4433 4447
DescriptorMajor head protein (1 entity in total)
Functional Keywordsbacteriophage, thermophage, caudovirales, siphoviridae, capsid, procapsid, auxiliary, hk97, virus
Biological sourceThermus virus P23-45
Total number of polymer chains7
Total molecular weight326765.28
Authors
Bayfield, O.W.,Klimuk, E.,Winkler, D.C.,Hesketh, E.L.,Chechik, M.,Cheng, N.,Dykeman, E.C.,Minakhin, L.,Ranson, N.A.,Severinov, K.,Steven, A.C.,Antson, A.A. (deposition date: 2018-11-29, release date: 2019-02-13, Last modification date: 2019-03-06)
Primary citation
Bayfield, O.W.,Klimuk, E.,Winkler, D.C.,Hesketh, E.L.,Chechik, M.,Cheng, N.,Dykeman, E.C.,Minakhin, L.,Ranson, N.A.,Severinov, K.,Steven, A.C.,Antson, A.A.
Cryo-EM structure and in vitro DNA packaging of a thermophilic virus with supersized T=7 capsids.
Proc. Natl. Acad. Sci. U.S.A., 116:3556-3561, 2019
PubMed: 30737287 (PDB entries with the same primary citation)
DOI: 10.1073/pnas.1813204116
MImport into Mendeley
Experimental method
ELECTRON MICROSCOPY
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Structure validation

ClashscoreRamachandran outliersSidechain outliers9 0.4% 0.2%MetricValuePercentile RanksWorseBetterPercentile relative to all structuresPercentile relative to all EM structures

More Asymmetric unit images

Molmil generated image of 6ibc
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Molmil generated image of 6ibc
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Molmil generated image of 6ibc
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More Biological unit images

Molmil generated image of 6ibc
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Molmil generated image of 6ibc
rotated about x axis by 90°
Molmil generated image of 6ibc
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (6ibc.pdb1.gz [20.79 MB])