6ATF

HLA-DRB1*1402 in complex with Vimentin59-71

6ATF の概要

• エントリーDOI: 10.2210/pdb6atf/pdb
• 分子名称: HLA class II histocompatibility antigen, DR alpha chain, MHC class II antigen, Vimentin59-71, ... (8 entities in total)
• 機能のキーワード: hla class ii, immune system
• 由来する生物種: Homo sapiens (Human); 詳細
• 細胞内の位置: Cell membrane; Single-pass type I membrane protein: P01903
• タンパク質・核酸の鎖数: 6
• 化学式量合計: 94887.28

構造登録者

Scally, S.W.,Ting, Y.T.,Rossjohn, J. (登録日: 2017-08-29, 公開日: 2017-09-13, 最終更新日: 2024-11-06)

主引用文献

Scally, S.W.,Law, S.C.,Ting, Y.T.,Heemst, J.V.,Sokolove, J.,Deutsch, A.J.,Bridie Clemens, E.,Moustakas, A.K.,Papadopoulos, G.K.,Woude, D.V.,Smolik, I.,Hitchon, C.A.,Robinson, D.B.,Ferucci, E.D.,Bernstein, C.N.,Meng, X.,Anaparti, V.,Huizinga, T.,Kedzierska, K.,Reid, H.H.,Raychaudhuri, S.,Toes, R.E.,Rossjohn, J.,El-Gabalawy, H.,Thomas, R.
Molecular basis for increased susceptibility of Indigenous North Americans to seropositive rheumatoid arthritis.
Ann. Rheum. Dis., 76:1915-1923, 2017

PubMed Abstract: The pathogenetic mechanisms by which alleles are associated with anticitrullinated peptide antibody (ACPA)-positive rheumatoid arthritis (RA) are incompletely understood. RA high-risk alleles are known to share a common motif, the 'shared susceptibility epitope (SE)'. Here, the electropositive P4 pocket of HLA-DRB1 accommodates self-peptide residues containing citrulline but not arginine. HLA-DRB1 His/Phe13β stratifies with ACPA-positive RA, while His13βSer polymorphisms stratify with ACPA-negative RA and RA protection. Indigenous North American (INA) populations have high risk of early-onset ACPA-positive RA, whereby HLA-DRB1*04:04 and HLA-DRB1*14:02 are implicated as risk factors for RA in INA. However, HLA-DRB1*14:02 has a His13βSer polymorphism. Therefore, we aimed to verify this association and determine its molecular mechanism.

PubMed: 28801345
DOI: 10.1136/annrheumdis-2017-211300

実験手法

X-RAY DIFFRACTION (1.9 Å)