5YO5

Crystal Structure of B562RIL with engineered disulfide bond A20C-Q25C

Summary for 5YO5

Related1M6T
DescriptorSoluble cytochrome b562 (2 entities in total)
Functional Keywordshemoprotein, fusion partner, helix bundle, electron transport
Biological sourceEscherichia coli
Total number of polymer chains8
Total molecular weight94907.09
Authors
Pu, M.,Xu, Z.,Song, G.,Liu, Z.J. (deposition date: 2017-10-26, release date: 2018-03-14, Last modification date: 2018-07-11)
Primary citation
Pu, M.,Xu, Z.,Peng, Y.,Hou, Y.,Liu, D.,Wang, Y.,Liu, H.,Song, G.,Liu, Z.J.
Protein crystal quality oriented disulfide bond engineering.
Protein Cell, 9:659-663, 2018
PubMed: 29039033 (PDB entries with the same primary citation)
DOI: 10.1007/s13238-017-0482-7
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.2 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.268160.7%1.9%1.1%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 5yo5
no rotation
Molmil generated image of 5yo5
rotated about x axis by 90°
Molmil generated image of 5yo5
rotated about y axis by 90°

More Biological unit images

Molmil generated image of 5yo5
no rotation
Molmil generated image of 5yo5
rotated about x axis by 90°
Molmil generated image of 5yo5
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (5yo5.pdb8.gz [19.7 KB])
Coordinate files for Biological unit (5yo5.pdb7.gz [19.32 KB])
Coordinate files for Biological unit (5yo5.pdb6.gz [19.2 KB])
Coordinate files for Biological unit (5yo5.pdb5.gz [19.35 KB])
Coordinate files for Biological unit (5yo5.pdb4.gz [20.48 KB])
Coordinate files for Biological unit (5yo5.pdb3.gz [20.3 KB])
Coordinate files for Biological unit (5yo5.pdb2.gz [20.46 KB])
Coordinate files for Biological unit (5yo5.pdb1.gz [20.15 KB])