5TZD

Structure of the WT S. venezulae BldD-(CTD-c-di-GMP)2 assembly intermediate

Summary for 5TZD

• Entry DOI: 10.2210/pdb5tzd/pdb
• Descriptor: DNA-binding protein, 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one) (3 entities in total)
• Functional Keywords: bldd, assembly intermediate, antibiotics, c-di-gmp, streptomyces, dna binding protein
• Biological source: Streptomyces venezuelae
• Total number of polymer chains: 4
• Total formula weight: 43463.35

Authors

Schumacher, M. (deposition date: 2016-11-21, release date: 2017-04-19, Last modification date: 2023-10-04)

• Primary citation: Schumacher, M.A.,Zeng, W.,Findlay, K.C.,Buttner, M.J.,Brennan, R.G.,Tschowri, N.; The Streptomyces master regulator BldD binds c-di-GMP sequentially to create a functional BldD2-(c-di-GMP)4 complex.; Nucleic Acids Res., 45:6923-6933, 2017; PubMed: 28449057; DOI: 10.1093/nar/gkx287

Experimental method

X-RAY DIFFRACTION (1.749 Å)