5NMA

Structure-activity relationship study of vitamin D analogs with oxolane group in their side chain

5NMA の概要

分子名称Vitamin D3 receptor A, Nuclear receptor coactivator 1, (1~{R},3~{S},5~{Z})-5-[(2~{E})-2-[(1~{R},3~{a}~{S},7~{a}~{R})-7~{a}-methyl-1-[(1~{S})-1-[(2~{S},5~{S})-5-(2-oxidanylpropan-2-yl)oxolan-2-yl]ethyl]-2,3,3~{a},5,6,7-hexahydro-1~{H}-inden-4-ylidene]ethylidene]-4-methylidene-cyclohexane-1,3-diol, ... (4 entities in total)
機能のキーワードvitamin d nuclear receptor, transcription
由来する生物種Danio rerio (Zebrafish)
詳細
細胞内の位置Nucleus Q9PTN2 Q15788
ポリマー鎖数2
分子量合計36281.39
構造登録者
Rochel, N.,Belorusova, A.Y. (登録日: 2017-04-05, 公開日: 2017-05-24, 最終更新日: 2017-09-06)
主引用文献
Belorusova, A.Y.,Martinez, A.,Gandara, Z.,Gomez, G.,Fall, Y.,Rochel, N.
Structure-activity relationship study of vitamin D analogs with oxolane group in their side chain.
Eur J Med Chem, 134:86-96, 2017
PubMed: 28399453 (主引用文献が同じPDBエントリー)
DOI: 10.1016/j.ejmech.2017.03.081
MImport into Mendeley
実験手法
X-RAY DIFFRACTION (2.8 Å)
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構造検証レポート

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.2721101.3%0.4%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
検証レポート(詳細版)をダウンロード