5JXJ

Structure of the proprotein convertase furin complexed to meta-guanidinomethyl-Phac-RVR-Amba in presence of EDTA

5JXJ の概要

• エントリーDOI: 10.2210/pdb5jxj/pdb
• 関連するBIRD辞書のPRD_ID: PRD_001220
• 分子名称: Furin, 2UC-ARG-VAL-ARG-00S, CALCIUM ION, ... (6 entities in total)
• 機能のキーワード: protease, inhibitor, proteolysis, hydrolase
• 由来する生物種: Homo sapiens (Human); 詳細
• 細胞内の位置: Golgi apparatus, trans-Golgi network membrane; Single-pass type I membrane protein: P09958
• タンパク質・核酸の鎖数: 2
• 化学式量合計: 53354.00

構造登録者

Dahms, S.O.,Arciniega, M.,Steinmetzer, T.,Huber, R.,Than, M.E. (登録日: 2016-05-13, 公開日: 2016-10-05, 最終更新日: 2024-11-06)

主引用文献

Dahms, S.O.,Arciniega, M.,Steinmetzer, T.,Huber, R.,Than, M.E.
Structure of the unliganded form of the proprotein convertase furin suggests activation by a substrate-induced mechanism.
Proc.Natl.Acad.Sci.USA, 113:11196-11201, 2016

PubMed Abstract: Proprotein convertases (PCs) are highly specific proteases required for the proteolytic modification of many secreted proteins. An unbalanced activity of these enzymes is connected to pathologies like cancer, atherosclerosis, hypercholesterolaemia, and infectious diseases. Novel protein crystallographic structures of the prototypical PC family member furin in different functional states were determined to 1.8-2.0 Å. These, together with biochemical data and modeling by molecular dynamics calculations, suggest essential elements underlying its unusually high substrate specificity. Furin shows a complex activation mechanism and exists in at least four defined states: (i) the "off state," incompatible with substrate binding as seen in the unliganded enzyme; (ii) the active "on state" seen in inhibitor-bound furin; and the respective (iii) calcium-free and (iv) calcium-bound forms. The transition from the off to the on state is triggered by ligand binding at subsites S1 to S4 and appears to underlie the preferential recognition of the four-residue sequence motif of furin. The molecular dynamics simulations of the four structural states reflect the experimental observations in general and provide approximations of the respective stabilities. Ligation by calcium at the PC-specific binding site II influences the active-site geometry and determines the rotamer state of the oxyanion hole-forming Asn295, and thus adds a second level of the activity modulation of furin. The described crystal forms and the observations of different defined functional states may foster the development of new tools and strategies for pharmacological intervention targeting furin.

PubMed: 27647913
DOI: 10.1073/pnas.1613630113

実験手法

X-RAY DIFFRACTION (2 Å)