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5IMY

Trapped Toxin

5IMY の概要
エントリーDOI10.2210/pdb5imy/pdb
分子名称Vaginolysin, CD59 glycoprotein (3 entities in total)
機能のキーワードtoxin-toxin receptor complex, toxin/toxin receptor
由来する生物種Gardnerella vaginalis
詳細
細胞内の位置Cell membrane; Lipid-anchor, GPI-anchor: P13987
タンパク質・核酸の鎖数4
化学式量合計126629.34
構造登録者
Lawrence, S.L.,Morton, C.J.,Parker, M.W. (登録日: 2016-03-07, 公開日: 2016-08-24, 最終更新日: 2024-11-06)
主引用文献Lawrence, S.L.,Gorman, M.A.,Feil, S.C.,Mulhern, T.D.,Kuiper, M.J.,Ratner, A.J.,Tweten, R.K.,Morton, C.J.,Parker, M.W.
Structural Basis for Receptor Recognition by the Human CD59-Responsive Cholesterol-Dependent Cytolysins.
Structure, 24:1488-1498, 2016
Cited by
PubMed Abstract: Cholesterol-dependent cytolysins (CDCs) are a family of pore-forming toxins that punch holes in the outer membrane of eukaryotic cells. Cholesterol serves as the receptor, but a subclass of CDCs first binds to human CD59. Here we describe the crystal structures of vaginolysin and intermedilysin complexed to CD59. These studies, together with small-angle X-ray scattering, reveal that CD59 binds to each at different, though overlapping, sites, consistent with molecular dynamics simulations and binding studies. The CDC consensus undecapeptide motif, which for the CD59-responsive CDCs has a proline instead of a tryptophan in the motif, adopts a strikingly different conformation between the structures; our data suggest that the proline acts as a selectivity switch to ensure CD59-dependent CDCs bind their protein receptor first in preference to cholesterol. The structural data suggest a detailed model of how these water-soluble toxins assemble as prepores on the cell surface.
PubMed: 27499440
DOI: 10.1016/j.str.2016.06.017
主引用文献が同じPDBエントリー
実験手法
X-RAY DIFFRACTION (2.4 Å)
構造検証レポート
Validation report summary of 5imy
検証レポート(詳細版)ダウンロードをダウンロード

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件を2026-04-15に公開中

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