5HJI

Crystal Structure of Pyrococcus abyssi Trm5a complexed with adenosine

Summary for 5HJI

Related5HJJ 5HJM 5HJK
DescriptortRNA (guanine(37)-N1)-methyltransferase Trm5a, ADENOSINE (3 entities in total)
Functional Keywordsmethyltransferase, trm5a, sam, adenosine, trna modification, transferase
Biological sourcePyrococcus abyssi (strain GE5 / Orsay)
Cellular locationCytoplasm  Q9V2G1
Total number of polymer chains1
Total molecular weight41025.75
Authors
Xie, W.,Wang, C.,Jia, Q. (deposition date: 2016-01-13, release date: 2016-10-12)
Primary citation
Wang, C.,Jia, Q.,Chen, R.,Wei, Y.,Li, J.,Ma, J.,Xie, W.
Crystal structures of the bifunctional tRNA methyltransferase Trm5a
Sci Rep, 6:33553-33553, 2016
PubMed: 27629654 (PDB entries with the same primary citation)
DOI: 10.1038/srep33553
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.2 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.23640.3%0.6%0.9%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 5hji
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Molmil generated image of 5hji
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Molmil generated image of 5hji
rotated about y axis by 90°