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5H0Q

Crystal structure of lipid binding protein Nakanori at 1.5A

5GNN」から置き換えられました
5H0Q の概要
エントリーDOI10.2210/pdb5h0q/pdb
分子名称Lipid binding protein (2 entities in total)
機能のキーワードsphingomyelin, cholesterol, lipid binding protein
由来する生物種Grifola frondosa
タンパク質・核酸の鎖数1
化学式量合計22793.28
構造登録者
主引用文献Makino, A.,Abe, M.,Ishitsuka, R.,Murate, M.,Kishimoto, T.,Sakai, S.,Hullin-Matsuda, F.,Shimada, Y.,Inaba, T.,Miyatake, H.,Tanaka, H.,Kurahashi, A.,Pack, C.G.,Kasai, R.S.,Kubo, S.,Schieber, N.L.,Dohmae, N.,Tochio, N.,Hagiwara, K.,Sasaki, Y.,Aida, Y.,Fujimori, F.,Kigawa, T.,Nishibori, K.,Parton, R.G.,Kusumi, A.,Sako, Y.,Anderluh, G.,Yamashita, M.,Kobayashi, T.,Greimel, P.,Kobayashi, T.
A novel sphingomyelin/cholesterol domain-specific probe reveals the dynamics of the membrane domains during virus release and in Niemann-Pick type C
FASEB J., 31:1301-1322, 2017
Cited by
PubMed Abstract: We identified a novel, nontoxic mushroom protein that specifically binds to a complex of sphingomyelin (SM), a major sphingolipid in mammalian cells, and cholesterol (Chol). The purified protein, termed nakanori, labeled cell surface domains in an SM- and Chol-dependent manner and decorated specific lipid domains that colocalized with inner leaflet small GTPase H-Ras, but not K-Ras. The use of nakanori as a lipid-domain-specific probe revealed altered distribution and dynamics of SM/Chol on the cell surface of Niemann-Pick type C fibroblasts, possibly explaining some of the disease phenotype. In addition, that nakanori treatment of epithelial cells after influenza virus infection potently inhibited virus release demonstrates the therapeutic value of targeting specific lipid domains for anti-viral treatment.-Makino, A., Abe, M., Ishitsuka, R., Murate, M., Kishimoto, T., Sakai, S., Hullin-Matsuda, F., Shimada, Y., Inaba, T., Miyatake, H., Tanaka, H., Kurahashi, A., Pack, C.-G., Kasai, R. S., Kubo, S., Schieber, N. L., Dohmae, N., Tochio, N., Hagiwara, K., Sasaki, Y., Aida, Y., Fujimori, F., Kigawa, T., Nishibori, K., Parton, R. G., Kusumi, A., Sako, Y., Anderluh, G., Yamashita, M., Kobayashi, T., Greimel, P., Kobayashi, T. A novel sphingomyelin/cholesterol domain-specific probe reveals the dynamics of the membrane domains during virus release and in Niemann-Pick type C.
PubMed: 27492925
DOI: 10.1096/fj.201500075R
主引用文献が同じPDBエントリー
実験手法
X-RAY DIFFRACTION (1.501 Å)
構造検証レポート
Validation report summary of 5h0q
検証レポート(詳細版)ダウンロードをダウンロード

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件を2026-04-22に公開中

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