5CFC

Crystal Structure of Human Cardiovirus SAFV-3

Summary for 5CFC

DescriptorVP1, VP3, VP2, ... (5 entities in total)
Functional Keywordsvirion, capsid, saffold virus, pathogen, virus
Biological sourceSaffold virus
Cellular locationHost cytoplasmic vesicle membrane ; Peripheral membrane protein ; Cytoplasmic side  C0MHL9 E3TMG8 C0MHL9
Total number of polymer chains4
Total molecular weight85303.64
Authors
Mullapudi, E.,Plevka, P. (deposition date: 2015-07-08, release date: 2016-06-15, Last modification date: 2018-04-11)
Primary citation
Mullapudi, E.,Novacek, J.,Palkova, L.,Kulich, P.,Lindberg, A.M.,van Kuppeveld, F.J.,Plevka, P.
Structure and Genome Release Mechanism of the Human Cardiovirus Saffold Virus 3.
J.Virol., 90:7628-7639, 2016
PubMed: 27279624 (PDB entries with the same primary citation)
DOI: 10.1128/JVI.00746-16
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.5 Å)
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Structure validation

ClashscoreRamachandran outliersSidechain outliersRSRZ outliers150.3%3.1%0.4%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 5cfc
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Molmil generated image of 5cfc
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Molmil generated image of 5cfc
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More Biological unit images

Molmil generated image of 5cfc
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Molmil generated image of 5cfc
rotated about x axis by 90°
Molmil generated image of 5cfc
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (5cfc.pdb1.gz [7.35 MB])