5C0Z

The structure of oxidized rat cytochrome c at 1.13 angstroms resolution

Summary for 5C0Z

• Entry DOI: 10.2210/pdb5c0z/pdb
• Descriptor: Cytochrome c, somatic, HEME C, HEXACYANOFERRATE(3-), ... (4 entities in total)
• Functional Keywords: cytochrome oxidized rat native, electron transport
• Biological source: Rattus norvegicus (Rat)
• Total number of polymer chains: 4
• Total formula weight: 49835.76

Authors

Edwards, B.F.P.,Mahapatra, G.,Vaishnav, A.A.,Brunzelle, J.S.,Huttemann, M. (deposition date: 2015-06-12, release date: 2016-09-21, Last modification date: 2024-10-09)

Primary citation

Kalpage, H.A.,Vaishnav, A.,Liu, J.,Varughese, A.,Wan, J.,Turner, A.A.,Ji, Q.,Zurek, M.P.,Kapralov, A.A.,Kagan, V.E.,Brunzelle, J.S.,Recanati, M.A.,Grossman, L.I.,Sanderson, T.H.,Lee, I.,Salomon, A.R.,Edwards, B.F.P.,Huttemann, M.
Serine-47 phosphorylation of cytochromecin the mammalian brain regulates cytochromecoxidase and caspase-3 activity.
Faseb J., :fj201901120R-fj201901120R, 2019

PubMed Abstract: Cytochrome (Cyt) is a multifunctional protein that operates as an electron carrier in the mitochondrial electron transport chain and plays a key role in apoptosis. We have previously shown that tissue-specific phosphorylations of Cyt in the heart, liver, and kidney play an important role in the regulation of cellular respiration and cell death. Here, we report that Cyt purified from mammalian brain is phosphorylated on S47 and that this phosphorylation is lost during ischemia. We have characterized the functional effects using phosphorylated Cyt purified from pig brain tissue and a recombinant phosphomimetic mutant (S47E). We crystallized S47E phosphomimetic Cyt at 1.55 Å and suggest that it spatially matches S47-phosphorylated Cyt, making it a good model system. Both S47-phosphorylated and phosphomimetic Cyt showed a lower oxygen consumption rate in reaction with isolated Cyt oxidase, which we propose maintains intermediate mitochondrial membrane potentials under physiologic conditions, thus minimizing production of reactive oxygen species. S47-phosphorylated and phosphomimetic Cyt showed lower caspase-3 activity. Furthermore, phosphomimetic Cyt had decreased cardiolipin peroxidase activity and is more stable in the presence of HO. Our data suggest that S47 phosphorylation of Cyt is tissue protective and promotes cell survival in the brain.-Kalpage, H. A., Vaishnav, A., Liu, J., Varughese, A., Wan, J., Turner, A. A., Ji, Q., Zurek, M. P., Kapralov, A. A., Kagan, V. E., Brunzelle, J. S., Recanati, M.-A., Grossman, L. I., Sanderson, T. H., Lee, I., Salomon, A. R., Edwards, B. F. P, Hüttemann, M. Serine-47 phosphorylation of cytochrome in the mammalian brain regulates cytochrome oxidase and caspase-3 activity.

PubMed: 31570002
DOI: 10.1096/fj.201901120R

Experimental method

X-RAY DIFFRACTION (1.1236 Å)