5B4Y

Crystal structure of the LA12 fragment of ApoER2

Summary for 5B4Y

Related5B4X
DescriptorLow-density lipoprotein receptor-related protein 8, CALCIUM ION (3 entities in total)
Functional Keywordssignal transduction, signaling protein
Biological sourceHomo sapiens (Human)
Cellular locationCell membrane ; Single-pass type I membrane protein  Q14114
Total number of polymer chains1
Total molecular weight9704.42
Authors
Nogi, T.,Tabata, S.,Hirai, H.,Yasui, N.,Takagi, J. (deposition date: 2016-04-20, release date: 2017-04-26)
Primary citation
Hirai, H.,Yasui, N.,Yamashita, K.,Tabata, S.,Yamamoto, M.,Takagi, J.,Nogi, T.
Crystal structure of the ectodomain from a LDLR close homologue in complex with its physiological ligand.
To Be Published,
Experimental method
X-RAY DIFFRACTION (1.9 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.242301.4%0MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution