5ZWE
Covalent bond formation between histidine of Vitamin D receptor (VDR) and a full agonist having a vinyl ketone group via conjugate addition reaction
Summary for 5ZWE
Entry DOI | 10.2210/pdb5zwe/pdb |
Descriptor | Vitamin D3 receptor, 13-meric peptide from DRIP205 NR2 BOX peptide, (6R)-6-[(1R,3aS,4E,7aR)-7a-methyl-4-[2-[(3R,5R)-4-methylidene-3,5-bis(oxidanyl)cyclohexylidene]ethylidene]-2,3,3a,5,6,7-hexahydro-1H-inden-1-yl]hept-1-en-3-one, ... (4 entities in total) |
Functional Keywords | hormone covalent modifier transcription factor vitamind3 enone michael addition electrophile, transcription |
Biological source | Rattus norvegicus (Rat) More |
Total number of polymer chains | 2 |
Total formula weight | 32564.51 |
Authors | Yoshizawa, M.,Itoh, T.,Anami, Y.,Kato, A.,Yoshimoto, N.,Yamamoto, K. (deposition date: 2018-05-15, release date: 2018-07-18, Last modification date: 2018-08-08) |
Primary citation | Yoshizawa, M.,Itoh, T.,Hori, T.,Kato, A.,Anami, Y.,Yoshimoto, N.,Yamamoto, K. Identification of the Histidine Residue in Vitamin D Receptor That Covalently Binds to Electrophilic Ligands J. Med. Chem., 61:6339-6349, 2018 Cited by PubMed: 29936834DOI: 10.1021/acs.jmedchem.8b00774 PDB entries with the same primary citation |
Experimental method | X-RAY DIFFRACTION (2.72 Å) |
Structure validation
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