5W2E
HCV NS5B RNA-dependent RNA polymerase in complex with non-nucleoside inhibitor MK-8876
Summary for 5W2E
Entry DOI | 10.2210/pdb5w2e/pdb |
Descriptor | Genome polyprotein, 2-(4-fluorophenyl)-5-(11-fluoro-6H-pyrido[2',3':5,6][1,3]oxazino[3,4-a]indol-2-yl)-N-methyl-6-[methyl(methylsulfonyl)amino]-1-benzofuran-3-carboxamide (3 entities in total) |
Functional Keywords | antiviral inhibitor, hcv, polymerase, viral protein, transferase-inhibitor complex, transferase/inhibitor |
Biological source | Hepatitis C virus genotype 1b (isolate BK) (HCV) |
Cellular location | Core protein p21: Host endoplasmic reticulum membrane; Single-pass membrane protein. Core protein p19: Virion . Envelope glycoprotein E1: Virion membrane ; Single-pass type I membrane protein . Envelope glycoprotein E2: Virion membrane ; Single-pass type I membrane protein . p7: Host endoplasmic reticulum membrane ; Multi-pass membrane protein . Protease NS2-3: Host endoplasmic reticulum membrane ; Multi-pass membrane protein . Serine protease NS3: Host endoplasmic reticulum membrane ; Peripheral membrane protein . Non-structural protein 4A: Host endoplasmic reticulum membrane ; Single-pass type I membrane protein . Non-structural protein 4B: Host endoplasmic reticulum membrane ; Multi-pass membrane protein . Non-structural protein 5A: Host endoplasmic reticulum membrane ; Peripheral membrane protein . RNA-directed RNA polymerase: Host endoplasmic reticulum membrane ; Single-pass type I membrane protein : P26663 |
Total number of polymer chains | 2 |
Total formula weight | 129368.01 |
Authors | Lesburg, C.A.,Ummat, A. (deposition date: 2017-06-06, release date: 2017-08-16, Last modification date: 2023-10-04) |
Primary citation | McComas, C.C.,Palani, A.,Chang, W.,Holloway, M.K.,Lesburg, C.A.,Li, P.,Liverton, N.,Meinke, P.T.,Olsen, D.B.,Peng, X.,Soll, R.M.,Ummat, A.,Wu, J.,Wu, J.,Zorn, N.,Ludmerer, S.W. Development of a New Structural Class of Broadly Acting HCV Non-Nucleoside Inhibitors Leading to the Discovery of MK-8876. ChemMedChem, 12:1436-1448, 2017 Cited by PubMed: 28741898DOI: 10.1002/cmdc.201700228 PDB entries with the same primary citation |
Experimental method | X-RAY DIFFRACTION (2.8 Å) |
Structure validation
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