4KHB

Structure of the Spt16D Pob3N heterodimer

4KHB の概要

• エントリーDOI: 10.2210/pdb4khb/pdb
• 関連するPDBエントリー: 4KHA 4KHO
• 分子名称: Uncharacterized protein SPT16D, Uncharacterized protein POB3N, SULFATE ION, ... (4 entities in total)
• 機能のキーワード: ph like domains, transcription-replication complex, transcription/replication
• 由来する生物種: Chaetomium thermophilum var. thermophilum; 詳細
• タンパク質・核酸の鎖数: 8
• 化学式量合計: 147080.34

構造登録者

Stuwe, T.,Zhang, E.,Ladurner, A.G. (登録日: 2013-04-30, 公開日: 2013-05-29, 最終更新日: 2024-02-28)

主引用文献

Hondele, M.,Stuwe, T.,Hassler, M.,Halbach, F.,Bowman, A.,Zhang, E.T.,Nijmeijer, B.,Kotthoff, C.,Rybin, V.,Amlacher, S.,Hurt, E.,Ladurner, A.G.
Structural basis of histone H2A-H2B recognition by the essential chaperone FACT.
Nature, 499:111-114, 2013

PubMed Abstract: Facilitates chromatin transcription (FACT) is a conserved histone chaperone that reorganizes nucleosomes and ensures chromatin integrity during DNA transcription, replication and repair. Key to the broad functions of FACT is its recognition of histones H2A-H2B (ref. 2). However, the structural basis for how histones H2A-H2B are recognized and how this integrates with the other functions of FACT, including the recognition of histones H3-H4 and other nuclear factors, is unknown. Here we reveal the crystal structure of the evolutionarily conserved FACT chaperone domain Spt16M from Chaetomium thermophilum, in complex with the H2A-H2B heterodimer. A novel 'U-turn' motif scaffolded onto a Rtt106-like module embraces the α1 helix of H2B. Biochemical and in vivo assays validate the structure and dissect the contribution of histone tails and H3-H4 towards Spt16M binding. Furthermore, we report the structure of the FACT heterodimerization domain that connects FACT to replicative polymerases. Our results show that Spt16M makes several interactions with histones, which we suggest allow the module to invade the nucleosome gradually and block the strongest interaction of H2B with DNA. FACT would thus enhance 'nucleosome breathing' by re-organizing the first 30 base pairs of nucleosomal histone-DNA contacts. Our snapshot of the engagement of the chaperone with H2A-H2B and the structures of all globular FACT domains enable the high-resolution analysis of the vital chaperoning functions of FACT, shedding light on how the complex promotes the activity of enzymes that require nucleosome reorganization.

PubMed: 23698368
DOI: 10.1038/nature12242

実験手法

X-RAY DIFFRACTION (2.4 Å)