4GVS

X-ray structure of the Archaeoglobus fulgidus methenyl-tetrahydromethanopterin cyclohydrolase in complex with N5-formyl-tetrahydromethanopterin

4GVS の概要

関連するPDBエントリー4GVQ 4GVR
分子名称Methenyltetrahydromethanopterin cyclohydrolase, 1-[4-({(1R)-1-[(6S,7R)-2-amino-5-formyl-7-methyl-4-oxo-1,4,5,6,7,8-hexahydropteridin-6-yl]ethyl}amino)phenyl]-1-deoxy-5-O-{5-O-[(R)-{[(1R)-1,3-dicarboxypropyl]oxy}(hydroxy)phosphoryl]-alpha-D-ribofuranosyl}-D-ribitol (3 entities in total)
機能のキーワードn5-formyl-tetrahydromethanopterin, hydrolase
由来する生物種Archaeoglobus fulgidus
細胞内の位置Cytoplasm O28344
ポリマー鎖数3
分子量合計105443.6
構造登録者
Upadhyay, V.,Demmer, U.,Warkentin, E.,Moll, J.,Shima, S.,Ermler, U. (登録日: 2012-08-31, 公開日: 2012-10-31, 最終更新日: 2014-02-05)
主引用文献
Upadhyay, V.,Demmer, U.,Warkentin, E.,Moll, J.,Shima, S.,Ermler, U.
Structure and catalytic mechanism of N(5),N(10)-methenyl-tetrahydromethanopterin cyclohydrolase.
Biochemistry, 51:8435-8443, 2012
PubMed: 23013430 (主引用文献が同じPDBエントリー)
DOI: 10.1021/bi300777k
MImport into Mendeley
実験手法
X-RAY DIFFRACTION (1.75 Å)
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構造検証レポート

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.223100.6%3.6%5.0%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
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