4GQ7

Crystal structure of Lg-Flo1p

Summary for 4GQ7

• Entry DOI: 10.2210/pdb4gq7/pdb
• Descriptor: Flocculin, CALCIUM ION, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... (4 entities in total)
• Functional Keywords: carbohydrate binding domain, pa14 domain, sugar binding protein
• Biological source: Saccharomyces pastorianus (Saccharomyces carlsbergensis)
• Total number of polymer chains: 1
• Total formula weight: 25152.68

Authors

Sim, L.,Groes, M.,Olesen, K.,Henriksen, A. (deposition date: 2012-08-22, release date: 2013-01-16, Last modification date: 2023-09-13)

Primary citation

Sim, L.,Groes, M.,Olesen, K.,Henriksen, A.
Structural and biochemical characterization of the N-terminal domain of flocculin Lg-Flo1p from Saccharomyces pastorianus reveals a unique specificity for phosphorylated mannose.
Febs J., 280:1073-1083, 2013

PubMed Abstract: The mechanism of yeast flocculation is generally considered to be mediated through the interaction of cell surface flocculins and mannan carbohydrates. In the present study, the crystal structure of the soluble 25-kDa lectin domain of flocculin 1 from brewer's yeast (Lg-Flo1p) was resolved to 2.5 Å, and its binding specificity towards oligosaccharides was investigated by fluorescence spectroscopy. Lg-Flo1p displays broad specificity towards sugars and has a 14-fold higher affinity for mannose 1-phosphate and glucose 1-phosphate compared to their unphosphorylated counterparts. Based on the results of a structural analysis, we propose that this higher affinity is the result of a charge interaction with a lysine residue in a carbohydrate-binding loop region, NAKAL, unique to NewFlo type flocculins. This raises the possibility of a unique mechanism of flocculation in NewFlo type yeast, which recognizes phosphorylated cell surface mannans.

PubMed: 23281814
DOI: 10.1111/febs.12102

Experimental method

X-RAY DIFFRACTION (2.53 Å)