4GO1

Crystal Structure of full length transcription repressor LsrR from E. coli.

4GO1 の概要

• エントリーDOI: 10.2210/pdb4go1/pdb
• 分子名称: Transcriptional regulator LsrR, GLYCEROL (3 entities in total)
• 機能のキーワード: hth motif, sorc/deor family, transcription repressor, p-ai-2, transcription
• 由来する生物種: Escherichia coli
• 細胞内の位置: Cytoplasm (Potential): P76141
• タンパク質・核酸の鎖数: 2
• 化学式量合計: 69985.99

構造登録者

Wu, M.,Tao, Y.,Liu, X.,Zang, J. (登録日: 2012-08-17, 公開日: 2013-04-24, 最終更新日: 2023-11-08)

主引用文献

Wu, M.,Tao, Y.,Liu, X.,Zang, J.
Structural Basis for Phosphorylated Autoinducer-2 Modulation of the Oligomerization State of the Global Transcription Regulator LsrR from Escherichia coli
J.Biol.Chem., 288:15878-15887, 2013

PubMed Abstract: Quorum-sensing systems are widely used by bacteria to control behavior in response to fluctuations in cell density. Several small diffusible molecules called autoinducers act as signaling molecules in quorum-sensing processes through interplay with sensors. Autoinducers modulate vital physiological functions such as nutrient acquisition, gene transcription, and virulence factor production. In Escherichia coli, LsrR serves as a global transcription regulator that responds to autoinducer-2 to regulate the expression of a variety of genes, including the lsr operon and the lsrR gene. Here, we report the crystal structure of full-length LsrR from E. coli, which has an N-terminal DNA-binding domain and a C-terminal ligand-binding domain connected by a β-strand. Although only two molecules are found in one asymmetric unit, two neighboring dimers pack to form a tetramer that is consistent with the oligomerization state of LsrR in solution. Mutagenesis experiments and gel shift assays indicated that Gln-33 and Tyr-26 might be involved in interactions between LsrR and DNA. The LsrR-binding site for phosphorylated autoinducer-2 was predicted by structural comparisons of LsrR with CggR and SorC. Cross-linking, size exclusion chromatography, and gel shift assays determined that phosphorylated autoinducer-2 triggered the disassembly of the LsrR tetramer into dimers and reduced the DNA binding ability of LsrR. Our findings reveal a mechanism for the change in the oligomerization state of LsrR in the presence of phosphorylated autoinducer-2. Based on these observations, we propose that phosphorylated autoinducer-2 triggers the disassembly of the LsrR tetramer to activate the transcription of its target genes.

PubMed: 23589368
DOI: 10.1074/jbc.M112.417634

実験手法

X-RAY DIFFRACTION (3 Å)