3ZM8

Crystal structure of Podospora anserina GH26-CBM35 beta-(1,4)- mannanase

3ZM8 の概要

• エントリーDOI: 10.2210/pdb3zm8/pdb
• 関連するPDBエントリー: 3ZIZ
• 分子名称: GH26 ENDO-BETA-1,4-MANNANASE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... (6 entities in total)
• 機能のキーワード: hydrolase, glycosyl hydrolase, cazy, gh5
• 由来する生物種: PODOSPORA ANSERINA
• タンパク質・核酸の鎖数: 1
• 化学式量合計: 53663.64

構造登録者

Couturier, M.,Roussel, A.,Rosengren, A.,Leone, P.,Stalbrand, H.,Berrin, J.G. (登録日: 2013-02-06, 公開日: 2013-04-17, 最終更新日: 2024-10-23)

主引用文献

Couturier, M.,Roussel, A.,Rosengren, A.,Leone, P.,Stalbrand, H.,Berrin, J.G.
Structural and Biochemical Analyses of Glycoside Hydrolase Families 5 and 26 Beta-(1,4)-Mannanases from Podospora Anserina Reveal Differences Upon Manno-Oligosaccharides Catalysis.
J.Biol.Chem., 288:14624-, 2013

PubMed Abstract: The microbial deconstruction of the plant cell wall is a key biological process that is of increasing importance with the development of a sustainable biofuel industry. The glycoside hydrolase families GH5 (PaMan5A) and GH26 (PaMan26A) endo-β-1,4-mannanases from the coprophilic ascomycete Podospora anserina contribute to the enzymatic degradation of lignocellulosic biomass. In this study, P. anserina mannanases were further subjected to detailed comparative analysis of their substrate specificities, active site organization, and transglycosylation capacity. Although PaMan5A displays a classical mode of action, PaMan26A revealed an atypical hydrolysis pattern with the release of mannotetraose and mannose from mannopentaose resulting from a predominant binding mode involving the -4 subsite. The crystal structures of PaMan5A and PaMan26A were solved at 1.4 and 2.85 Å resolution, respectively. Analysis of the PaMan26A structure supported strong interaction with substrate at the -4 subsite mediated by two aromatic residues Trp-244 and Trp-245. The PaMan26A structure appended to its family 35 carbohydrate binding module revealed a short and proline-rich rigid linker that anchored together the catalytic and the binding modules.

PubMed: 23558681
DOI: 10.1074/JBC.M113.459438

実験手法

X-RAY DIFFRACTION (2.85 Å)