3VYK

Crystal structure of C-type lectin domain of murine dendritic cell inhibitory receptor 2 in complex with N-glycan

Summary for 3VYK

• Entry DOI: 10.2210/pdb3vyk/pdb
• Related: 3VYJ
• Descriptor: C-type lectin domain family 4, member a4, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)][2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]methyl alpha-D-mannopyranoside, CALCIUM ION, ... (6 entities in total)
• Functional Keywords: c-type lectin fold, cell surface, carbohydrate binding protein
• Biological source: Mus musculus (mouse)
• Total number of polymer chains: 1
• Total formula weight: 16382.95

Authors

Nagae, M.,Yamanaka, K.,Hanashima, S.,Ikeda, A.,Satoh, T.,Matsumoto, N.,Yamamoto, K.,Yamaguchi, Y. (deposition date: 2012-09-26, release date: 2013-10-02, Last modification date: 2020-07-29)

• Primary citation: Nagae, M.,Yamanaka, K.,Hanashima, S.,Ikeda, A.,Morita-Matsumoto, K.,Satoh, T.,Matsumoto, N.,Yamamoto, K.,Yamaguchi, Y.; Recognition of Bisecting N-Acetylglucosamine: STRUCTURAL BASIS FOR ASYMMETRIC INTERACTION WITH THE MOUSE LECTIN DENDRITIC CELL INHIBITORY RECEPTOR 2; J.Biol.Chem., 288:33598-33610, 2013; PubMed: 24108122; DOI: 10.1074/jbc.M113.513572

Experimental method

X-RAY DIFFRACTION (1.5 Å)