3ND2

Structure of Yeast Importin-beta (Kap95p)

Summary for 3ND2

• Entry DOI: 10.2210/pdb3nd2/pdb
• Descriptor: Importin subunit beta-1 (2 entities in total)
• Functional Keywords: importin, karyopherin, nuclear import, receptor, nuclear transport, transport protein
• Biological source: Saccharomyces cerevisiae (yeast)
• Cellular location: Cytoplasm (By similarity): Q06142
• Total number of polymer chains: 1
• Total formula weight: 94843.27

Authors

Forwood, J.K.,Kobe, B. (deposition date: 2010-06-06, release date: 2010-07-07, Last modification date: 2023-11-01)

Primary citation

Forwood, J.K.,Lange, A.,Zachariae, U.,Marfori, M.,Preast, C.,Grubmuller, H.,Stewart, M.,Corbett, A.H.,Kobe, B.
Quantitative Structural Analysis of Importin-beta Flexibility: Paradigm for Solenoid Protein Structures
Structure, 18:1171-1183, 2010

PubMed Abstract: The structure of solenoid proteins facilitates a higher degree of flexibility than most folded proteins. In importin-β, a nuclear import factor built from 19 tandem HEAT repeats, flexibility plays a crucial role in allowing interactions with a range of different partners. We present a comprehensive analysis of importin-β flexibility based on a number of different approaches. We determined the crystal structure of unliganded Saccharomyces cerevisiae importin-β (Kap95) to allow a quantitative comparison with importin-β bound to different partners. Complementary mutagenesis, small angle X-ray scattering and molecular dynamics studies suggest that the protein samples several conformations in solution. The analyses suggest the flexibility of the solenoid is generated by cumulative small movements along its length. Importin-β illustrates how solenoid proteins can orchestrate protein interactions in many cellular pathways.

PubMed: 20826343
DOI: 10.1016/j.str.2010.06.015

Experimental method

X-RAY DIFFRACTION (2.4 Å)