Atomic-level structure of the entire HIV-1 capsid (186 hexamers + 12 pentamers)

This is a large structure.

Summary for 3J3Y

Related3J34 3J3Q
Integrates1VUU 1VUV 1VUW 1VUX 1VUY 1VUZ 1VV0 1VV1 1VV2 1VV3 1VV4 1VV5 1VV6 1VV7 1VV8 1VV9 1VVA 1VVB 1VVF 1VVG 1VVH 1VVI
EMDB information5639
Descriptorcapsid protein (1 entity in total)
Functional Keywordshiv-1 capsid, core, all-atom model, complete capsid, virus
Biological sourceHuman immunodeficiency virus 1 (HIV-1)
Total number of polymer chains1176
Total molecular weight30226128.24
Perilla, J.R.,Zhao, G.,Zhang, P.,Schulten, K.J. (deposition date: 2013-05-06, release date: 2013-05-29, Last modification date: 2018-07-18)
Primary citation
Zhao, G.,Perilla, J.R.,Yufenyuy, E.L.,Meng, X.,Chen, B.,Ning, J.,Ahn, J.,Gronenborn, A.M.,Schulten, K.,Aiken, C.,Zhang, P.
Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics.
Nature, 497:643-646, 2013
PubMed: 23719463 (PDB entries with the same primary citation)
DOI: 10.1038/nature12162
MImport into Mendeley
Experimental method

Structure validation

Clashscore0MetricValuePercentile RanksWorseBetterPercentile relative to all structuresPercentile relative to all EM structures