3IO5

Crystal Structure of a dimeric form of the uvsX Recombinase core domain from Enterobacteria Phage T4

3IO5 の概要

• エントリーDOI: 10.2210/pdb3io5/pdb
• 分子名称: Recombination and repair protein, PHOSPHATE ION (3 entities in total)
• 機能のキーワード: storage dimer, inactive conformation, reca like core domain, atp-binding, dna damage, dna recombination, dna repair, dna replication, nucleotide-binding, dna binding protein
• 由来する生物種: Enterobacteria phage T4 (Bacteriophage T4)
• タンパク質・核酸の鎖数: 2
• 化学式量合計: 75097.60

構造登録者

Gajewski, S. (登録日: 2009-08-13, 公開日: 2010-08-25, 最終更新日: 2024-02-21)

主引用文献

Gajewski, S.,Webb, M.R.,Galkin, V.,Egelman, E.H.,Kreuzer, K.N.,White, S.W.
Crystal Structure of the Phage T4 Recombinase UvsX and Its Functional Interaction with the T4 SF2 Helicase UvsW.
J.Mol.Biol., 405:65-76, 2011

PubMed Abstract: Bacteriophage T4 provides an important model system for studying the mechanism of homologous recombination. We have determined the crystal structure of the T4 UvsX recombinase, and the overall architecture and fold closely resemble those of RecA, including a highly conserved ATP binding site. Based on this new structure, we reanalyzed electron microscopy reconstructions of UvsX-DNA filaments and docked the UvsX crystal structure into two different filament forms: a compressed filament generated in the presence of ADP and an elongated filament generated in the presence of ATP and aluminum fluoride. In these reconstructions, the ATP binding site sits at the protomer interface, as in the RecA filament crystal structure. However, the environment of the ATP binding site is altered in the two filament reconstructions, suggesting that nucleotide cannot be as easily accommodated at the protomer interface of the compressed filament. Finally, we show that the phage helicase UvsW completes the UvsX-promoted strand-exchange reaction, allowing the generation of a simple nicked circular product rather than complex networks of partially exchanged substrates.

PubMed: 21035462
DOI: 10.1016/j.jmb.2010.10.004

実験手法

X-RAY DIFFRACTION (2.4 Å)