3GAV

Solution structure of Human Complement Factor H in 137 mM NaCl buffer

3GAV の概要

• エントリーDOI: 10.2210/pdb3gav/pdb
• 関連するPDBエントリー: 1HAQ 1HFH 2G7I 2IC4 2QFG 2QFH 2RLP 2RLQ 2UWN 3GAU 3GAW
• 分子名称: Complement factor H (1 entity in total)
• 機能のキーワード: x-ray solution scattering, complement factor h, scr domain, age-related macular degeneration, complement alternate pathway, disease mutation, glycoprotein, immune response, innate immunity, secreted, sushi, immune system
• 由来する生物種: Homo sapiens (Human)
• 細胞内の位置: Secreted: P08603
• タンパク質・核酸の鎖数: 1
• 化学式量合計: 137188.39

構造登録者

Okemefuna, A.I.,Nan, R.,Gor, J.,Perkins, S.J. (登録日: 2009-02-18, 公開日: 2009-06-09, 最終更新日: 2024-02-21)

主引用文献

Okemefuna, A.I.,Nan, R.,Gor, J.,Perkins, S.J.
Electrostatic interactions contribute to the folded-back conformation of wild type human factor H.
J.Mol.Biol., 391:98-118, 2009

PubMed Abstract: Factor H (FH), a major serum regulator of C3b in the complement alternative pathway, is composed of 20 short complement regulator (SCR) domains. Earlier solution structures for FH showed that this has a folded-back domain arrangement and exists as oligomers. To clarify the molecular basis for this, analytical ultracentrifugation and X-ray scattering studies of native FH were performed as a function of NaCl concentration and pH. The sedimentation coefficient for the FH monomer decreased from 5.7 S to 5.3 S with increase in NaCl concentration, showing that weak electrostatic inter-domain interactions affect its folded-back structure. FH became more elongated at pH 9.4, showing the involvement of histidine residue(s) in its folded-back structure. Similar studies of partially deglycosylated FH suggested that oligosaccharides were not significant in determining the FH domain structure. The formation of FH oligomers decreased with increased NaCl concentration, indicating that electrostatic interactions also affect this. X-ray scattering showed that the maximum length of FH increased from 32 nm in low salt to 38 nm in high salt. Constrained X-ray scattering modelling was used to generate significantly improved FH molecular structures at medium resolution. In 50 mM NaCl, the modelled structures showed that inter-SCR domain contacts are likely, while these contacts are fewer in 250 mM NaCl. The results of this study show that the conformation of FH is affected by its local environment, and this may be important for its interactions with C3b and when bound to polyanionic cell surfaces.

PubMed: 19505476
DOI: 10.1016/j.jmb.2009.06.010

実験手法

SOLUTION SCATTERING